DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fak and src

DIOPT Version :10

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_017209008.1 Gene:src / 325084 ZFINID:ZDB-GENE-030131-3809 Length:549 Species:Danio rerio


Alignment Length:302 Identity:102/302 - (33%)
Similarity:155/302 - (51%) Gaps:39/302 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 YELDRALITPSAKIGVGQFGDVYVGTYTLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKT 514
            :|:.|..:....|:|.|.||:|::||:             ||               ..:|||||
Zfish   276 WEIPRDSLRLDVKLGQGCFGEVWMGTW-------------NG---------------TTRVAIKT 312

  Fly   515 CKAND-DPEKTENFLAEAYIMQKFDHPHIIRLIGICSVMPIWIVMELAKLGELRAYLKTN-SERL 577
            .|... .||.   ||.||.:|:|..|..:::|..:.|..||:||.|....|.|..:||.: .:.|
Zfish   313 LKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMGQGSLLDFLKGDMGKML 374

  Fly   578 SHGTLLKYCYQLSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTV 642
            ....|:....|:::.::|:|...:||||:.|.|:||......|:|||||:|.:.|.. |.:....
Zfish   375 RLPQLVDMASQIASGMAYVERMNYVHRDLRAANILVGDNLVCKVADFGLARLIEDNE-YTARQGA 438

  Fly   643 ALPIKWMSPESINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNC 707
            ..||||.:||:..:.|||..||||.||:.:.|:...|..|:.|:.|.:|:.::|.|.|:|.|..|
Zfish   439 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPAEC 503

  Fly   708 PPRLYSLMSQCWAYEPLKRPNFKRIKETLHEILIEDSINSSE 749
            |..|:.||..||..||.:||.|:.::.     .:||...|:|
Zfish   504 PDSLHELMLTCWRKEPEERPTFEYLQG-----FLEDYFTSTE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604
FERM_B-lobe 152..257 CDD:271216
FERM_C_FAK1 263..394 CDD:270011
PTKc_FAK 450..744 CDD:133187 99/295 (34%)
Focal_AT 1250..1376 CDD:460992
srcXP_017209008.1 SH3 85..148 CDD:473055
SH2_Src_Src 162..260 CDD:198228
PTKc_Src 273..549 CDD:270656 102/302 (34%)
Blue background indicates that the domain is not in the aligned region.

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