DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fak and Lck

DIOPT Version :10

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_006238994.1 Gene:Lck / 313050 RGDID:2994 Length:520 Species:Rattus norvegicus


Alignment Length:429 Identity:123/429 - (28%)
Similarity:192/429 - (44%) Gaps:100/429 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 SKSGENTTEPELQNFNCNCQKIKTQIKISASNNVEDLV---ITCNGINTAESIADLI-------D 376
            |:|...:....:::|:.|..::....||...:|....:   ||..|::      ||:       |
  Rat   167 SESTAGSFSLSVRDFDQNQGEVVKHYKIRNLDNGGFYISPRITFPGLH------DLVRHYTNASD 225

  Fly   377 GYCRLLSKDLEFTIWHRETNASNEDSAKALPNDATLGSNKSTSSQGKPMLTDDYAEIGLLEGEGD 441
            |.|..||:..:                              |....||...|:            
  Rat   226 GLCTKLSRPCQ------------------------------TQKPQKPWWEDE------------ 248

  Fly   442 YSTPTVRNYELDRALITPSAKIGVGQFGDVYVGTYTLPKLGKGKNLAGNGKNSNSDQRNADSRPD 506
                    :|:.|..:....::|.||||:|::|.|             ||..             
  Rat   249 --------WEVPRETLKLVERLGAGQFGEVWMGYY-------------NGHT------------- 279

  Fly   507 VIQVAIKTCKAND-DPEKTENFLAEAYIMQKFDHPHIIRLIGICSVMPIWIVMELAKLGELRAYL 570
              :||:|:.|... .|:.   |||||.:|::..||.::||..:.:..||:|:.|..:.|.|..:|
  Rat   280 --KVAVKSLKQGSMSPDA---FLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFL 339

  Fly   571 KTNSE-RLSHGTLLKYCYQLSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQS 634
            ||.|. :|:...||....|::..::::|.:.::|||:.|.|:|||.....|:|||||:|.:.|..
  Rat   340 KTPSGIKLNVNKLLDMAAQIAEGMAFIEEQNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 404

  Fly   635 YYHSTPTVALPIKWMSPESINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGE 699
             |.:......||||.:||:||:..||..||||.||:.:.||:..|..|:.|:.|.:||..||.|.
  Rat   405 -YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLEKGY 468

  Fly   700 RLPLPPNCPPRLYSLMSQCWAYEPLKRPNFKRIKETLHE 738
            |:..|.|||..||.||..||...|..||.|..::..|.:
  Rat   469 RMVRPDNCPEELYHLMMLCWKERPEDRPTFDYLRSVLDD 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604
FERM_B-lobe 152..257 CDD:271216
FERM_C_FAK1 263..394 CDD:270011 17/81 (21%)
PTKc_FAK 450..744 CDD:133187 102/291 (35%)
Focal_AT 1250..1376 CDD:460992
LckXP_006238994.1 SH3_Lck 76..129 CDD:212938
SH2_Src_Lck 134..234 CDD:198225 17/72 (24%)
PTKc_Lck_Blk 248..511 CDD:270652 102/312 (33%)
Blue background indicates that the domain is not in the aligned region.

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