DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fak and Src

DIOPT Version :10

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_006499126.1 Gene:Src / 20779 MGIID:98397 Length:552 Species:Mus musculus


Alignment Length:302 Identity:104/302 - (34%)
Similarity:157/302 - (51%) Gaps:39/302 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   450 YELDRALITPSAKIGVGQFGDVYVGTYTLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKT 514
            :|:.|..:....|:|.|.||:|::||:             ||               ..:|||||
Mouse   279 WEIPRESLRLEVKLGQGCFGEVWMGTW-------------NG---------------TTRVAIKT 315

  Fly   515 CKAND-DPEKTENFLAEAYIMQKFDHPHIIRLIGICSVMPIWIVMELAKLGELRAYLKTNSER-L 577
            .|... .||.   ||.||.:|:|..|..:::|..:.|..||:||.|....|.|..:||..:.: |
Mouse   316 LKPGTMSPEA---FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYL 377

  Fly   578 SHGTLLKYCYQLSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTV 642
            ....|:....|:::.::|:|...:||||:.|.|:||......|:|||||:|.:.|.. |.:....
Mouse   378 RLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQGA 441

  Fly   643 ALPIKWMSPESINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNC 707
            ..||||.:||:..:.|||..||||.||:.:.|:...|..|:.|:.|.:|:.::|.|.|:|.||.|
Mouse   442 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 506

  Fly   708 PPRLYSLMSQCWAYEPLKRPNFKRIKETLHEILIEDSINSSE 749
            |..|:.||.|||..||.:||.|:.:     :..:||...|:|
Mouse   507 PESLHDLMCQCWRKEPEERPTFEYL-----QAFLEDYFTSTE 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604
FERM_B-lobe 152..257 CDD:271216
FERM_C_FAK1 263..394 CDD:270011
PTKc_FAK 450..744 CDD:133187 101/295 (34%)
Focal_AT 1250..1376 CDD:460992
SrcXP_006499126.1 SH3_Src 87..159 CDD:212941
SH2_Src_Src 163..263 CDD:198228
PTKc_Src 276..552 CDD:270656 104/302 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.