DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fak and Ptk2

DIOPT Version :9

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:XP_006520478.1 Gene:Ptk2 / 14083 MGIID:95481 Length:1140 Species:Mus musculus


Alignment Length:1382 Identity:432/1382 - (31%)
Similarity:622/1382 - (45%) Gaps:415/1382 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IRRTVEDLGTDGRTPSIQRYACRMLNMITKEVIWLARSTSMQKVLSHILTPGCSNVDCPNNQSEL 112
            :|..::.:....:...:..|..|:.::.::||.||           |: ..|.|:|        .
Mouse   108 VRGIIQKIVDSHKVKHVACYGFRLSHLRSEEVHWL-----------HV-DMGVSSV--------R 152

  Fly   113 DEVLLEHGRRITDNRVWRVELRVRYVPNNIQELFEEDKATCFYYFNQVKEDFIQANVTAIDTEVA 177
            ::..|.|     ....|:.|||:||:|......|.|||.|..:::.|||.|::|.....:|.|:|
Mouse   153 EKYELAH-----PPEEWKYELRIRYLPKGFLNQFTEDKPTLNFFYQQVKSDYMQEIADQVDQEIA 212

  Fly   178 VQLCCLGIRHYFKNITVKAPDKKQHIDYIEKEIGFKSFLPQSVIATSKPKNLKKLIQVGYKKVYN 242
            ::|.||.||..:..:...|.:||.:.:.:||::|.|.|.|:|::.:.|.|.|:||||..:::..|
Mouse   213 LKLGCLEIRRSYWEMRGNALEKKSNYEVLEKDVGLKRFFPKSLLDSVKAKTLRKLIQQTFRQFAN 277

  Fly   243 YNDIEYLTRFFDLLKNIYLTNFEQFSVTLSSAWNISGILHVGPHIGISYQTHPQASLKNVAQFKD 307
            .|..|.:.:||::|..:|..:.|.|...|.|:|.||..|.:||..||||.|....:..::|.|..
Mouse   278 LNREESILKFFEILSPVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGCNPTHLADFNQ 342

  Fly   308 VVSIKTCTLPKEKLSKSGENTTEPELQNFNCNCQKIKTQIKISASNNVEDLVITCNGINTAESIA 372
            |.:|                    :..|.....:|...|:||:.:  .|.|.:|...:..||::|
Mouse   343 VQTI--------------------QYSNSEDKDRKGMLQLKIAGA--PEPLTVTAPSLTIAENMA 385

  Fly   373 DLIDGYCRLLSKDLEFTIWHRETNASNEDSAKALPNDATLGSNK-------STSSQG-------- 422
            |||||||||::...:..|...:     ::..:|||:...|.:::       :.|..|        
Mouse   386 DLIDGYCRLVNGATQSFIIRPQ-----KEGERALPSIPKLANSEKQGMRTHAVSVSGVSHCQHKV 445

  Fly   423 ------KPML----------------TDDYAEIGLLEGEGDYSTPT-------VRNYELDRALIT 458
                  .|::                |||||||  ::.|..|:.|:       .|:||:.|..|.
Mouse   446 KKARRFLPLVFCSLEPPPTDEISGDETDDYAEI--IDEEDTYTMPSKSYGIDEARDYEIQRERIE 508

  Fly   459 PSAKIGVGQFGDVYVGTYTLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKTCKANDDPEK 523
            ....||.||||||:.|.|..|:                       .| .:.|||||||.......
Mouse   509 LGRCIGEGQFGDVHQGVYLSPE-----------------------NP-ALAVAIKTCKNCTSDSV 549

  Fly   524 TENFLAEAYIMQKFDHPHIIRLIGICSVMPIWIVMELAKLGELRAYLKTNSERLSHGTLLKYCYQ 588
            .|.||.||..|::||||||::|||:.:..|:||:|||..|||||::|:.....|...:|:.|.||
Mouse   550 REKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ 614

  Fly   589 LSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTVALPIKWMSPES 653
            |||||:|||||:|||||||||||||||..||||.||||||::.|.:||.::.. .||||||:|||
Mouse   615 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-KLPIKWMAPES 678

  Fly   654 INFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNCPPRLYSLMSQC 718
            |||||||:||||||||||:|||||.||||||||||:|||.::|||||||:||||||.|||||::|
Mouse   679 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKC 743

  Fly   719 WAYEPLKRPNFKRIKETLHEILIEDSINSSETLKREQRKVASMSWI--GSDDIDIPPSKPSRVMH 781
            |||:|.:||.|..:|..|..||.|:.:...|.::.|.|:.|::||.  |||:   .|.||||   
Mouse   744 WAYDPSRRPRFTELKAQLSTILEEEKVQQEERMRMESRRQATVSWDSGGSDE---APPKPSR--- 802

  Fly   782 DPDITGLMPETTGLPQTYIIAQNPAVLAKLMMENQKRGINPAAYTTPASVFNTLAVGLDDSNPNV 846
                                                     ..|.:|.|                
Mouse   803 -----------------------------------------PGYPSPRS---------------- 810

  Fly   847 SLKTTKLPAADLLKLDPIAESERLRSQFSANSSASQLANPLTASVNPHESLNSHQAGMFTGSLPS 911
                                ||                                      |..||
Mouse   811 --------------------SE--------------------------------------GFYPS 817

  Fly   912 KSSFVVCPPQTEEHMQAENISNPSVSKVSGYSLYGSLERHQPPPAKAMHSKGGSLERHQ-SLMSA 975
            ....|    ||..:            :||||           |.:..:.:..||:.:.| ||:..
Mouse   818 PQHMV----QTNHY------------QVSGY-----------PGSHGIPAMAGSIYQGQASLLDQ 855

  Fly   976 QNLVFYNTKPPPNCTNTAERSRSMERNTYFHAYRQQMKTSIECEALPEEIYDFGGIGLKTCVSAR 1040
            ..|  :|.:|                        |:|.                           
Mouse   856 TEL--WNHRP------------------------QEMS--------------------------- 867

  Fly  1041 QQPKFSPMVNVRPAELGQVQNTDCMGLQQNIPMDSFGVISPHNLDESL-RHQREME--RQWMTSG 1102
               .:.|.|....|       .|..|:.|.:|        ||.::|.| |.|:|||  ::|:.. 
Mouse   868 ---MWQPSVEDSAA-------LDLRGMGQVLP--------PHLMEERLIRQQQEMEEDQRWLEK- 913

  Fly  1103 PQSITVNPNISISEGAACLATLQAEAMGNQGIHNVLGEKLRQQQKDSNSDSEWLIQEELLRSCSI 1167
             :...:.|::.:|.|     ::..|....||                                  
Mouse   914 -EERFLKPDVRLSRG-----SIDREDGSFQG---------------------------------- 938

  Fly  1168 PQGSLNDHQAQMFKLDFMSAGPSSLPDCSNSSSRPMTPNA--NLSSLKSNHSSADHLSSLTSAEE 1230
            |.|  |.|..|          |...||.:....:|..|.|  :||:|.|..|.||..:.      
Mouse   939 PTG--NQHIYQ----------PVGKPDPAAPPKKPPRPGAPGHLSNLSSISSPADSYNE------ 985

  Fly  1231 QMGSNARNLGSAVPSRPP----NRADDEVYCATTLVVKSIMALSQGVEKANTEGYLELVKNVGVK 1291
              |.....|.....|.||    :|::|:||...|.:||:::.:|..::.|..|.|:.:||.||:.
Mouse   986 --GVKPWRLQPQEISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEVGLA 1048

  Fly  1292 LRNLLTSVDKISIIFPAQALKEVQMAHQVLSKDMHELVSAMRLAQQYSDTTLDCEYRKSMLSAAH 1356
            ||.||.:||:.....||...:|::||.::|:.|:.||:|.|:|||||..|:|..||:|.||:|||
Mouse  1049 LRTLLATVDETIPALPASTHREIEMAQKLLNSDLGELISKMKLAQQYVMTSLQQEYKKQMLTAAH 1113

  Fly  1357 VLAMDAKNLFDVVDSIR 1373
            .||:|||||.||:|..|
Mouse  1114 ALAVDAKNLLDVIDQAR 1130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604 63/218 (29%)
FERM_B-lobe 152..257 CDD:271216 36/104 (35%)
FERM_C_FAK1 263..394 CDD:270011 40/130 (31%)
PTKc_FAK 450..744 CDD:133187 168/293 (57%)
Pkinase_Tyr 462..736 CDD:285015 160/273 (59%)
Focal_AT 1249..1376 CDD:281606 58/125 (46%)
Ptk2XP_006520478.1 FERM_N_2 79..174 CDD:407875 19/90 (21%)
B41 80..302 CDD:214604 63/218 (29%)
FERM_C_FAK1 298..408 CDD:270011 40/136 (29%)
PTKc_FAK 500..769 CDD:133187 168/293 (57%)
Focal_AT 1004..1133 CDD:397606 58/127 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 324 1.000 Domainoid score I1198
eggNOG 1 0.900 - - E1_KOG4257
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7314
Inparanoid 1 1.050 653 1.000 Inparanoid score I777
Isobase 1 0.950 - 0 Normalized mean entropy S3805
OMA 1 1.010 - - QHG46813
OrthoDB 1 1.010 - - D29350at33208
OrthoFinder 1 1.000 - - FOG0002650
OrthoInspector 1 1.000 - - otm44146
orthoMCL 1 0.900 - - OOG6_105566
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4950
SonicParanoid 1 1.000 - - X1755
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.720

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