DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and PEF1

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_011572.2 Gene:PEF1 / 852949 SGDID:S000003290 Length:335 Species:Saccharomyces cerevisiae


Alignment Length:299 Identity:62/299 - (20%)
Similarity:117/299 - (39%) Gaps:49/299 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 ETQ--NNMEENDDHVGYGGKADTITPGFPTPKPIDPQKEGLRRLFDSIAGKDMEVDWMELKRILD 624
            :||  .|..||..| .| |...:.:|.. |..|:||:       ::.||.|.             
Yeast    61 QTQYNKNRAENGHH-SY-GSPQSYSPRH-TKTPVDPR-------YNVIAQKP------------- 102

  Fly   625 HSMRDDLPKPVVFNRFSNNMAFETQAAGPG---DDGAGACGLLSLICGPFLKGTPFEEQLGMND- 685
             :.|...|.|..:|..  |.:.:..|:.|.   .:.|....||..:.     ...|:.:..:.| 
Yeast   103 -AGRPIPPAPTHYNNL--NTSAQRIASSPPPLIHNQAVPAQLLKKVA-----PASFDSREDVRDM 159

  Fly   686 QSNKRLIGDNPADG-GPVTANAIV-----DETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLS 744
            |...:|..::...| ..:||..:.     |:...|......:::.:..|.:.|.:...||..|..
Yeast   160 QVATQLFHNHDVKGKNRLTAEELQNLLQNDDNSHFCISSVDALINLFGASRFGTVNQAEFIALYK 224

  Fly   745 EIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYG---SRDG---KIAFDD 803
            .:..|:.::...|:..:..:|..:...:|...||.:...|......:|.   :|:|   ::.||.
Yeast   225 RVKSWRKVYVDNDINGSLTISVSEFHNSLQELGYLIPFEVSEKTFDQYAEFINRNGTGKELKFDK 289

  Fly   804 FIMCAVKIKTYIDIFKERDTEKNETATFTLEEWIERTIY 842
            |:...|.:.....:|::.||.:...||...:::|:.|:|
Yeast   290 FVEALVWLMRLTKLFRKFDTNQEGIATIQYKDFIDATLY 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042
Calpain_III 418..565 CDD:279416 2/4 (50%)
EFh 719..765 CDD:238008 7/45 (16%)
PEF1NP_011572.2 EFh_PEF_Group_I 161..329 CDD:320055 33/168 (20%)
EF-hand motif 161..190 CDD:320055 4/28 (14%)
EF-hand motif 198..227 CDD:320055 5/28 (18%)
EF-hand motif 228..257 CDD:320055 4/28 (14%)
EF-hand motif 264..298 CDD:320055 8/33 (24%)
EF-hand motif 300..328 CDD:320055 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I3060
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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