DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and capn8.1

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_031757616.1 Gene:capn8.1 / 733929 XenbaseID:XB-GENE-920785 Length:1515 Species:Xenopus tropicalis


Alignment Length:775 Identity:323/775 - (41%)
Similarity:448/775 - (57%) Gaps:124/775 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QDYETILNSCLASGSLFEDPLFPASNESLQFSR-----RPDRHIEWLRPHEIAENPQFFVEGYSR 147
            ||:|.:...|||||:||:|..|||...:|.|:.     ...:.:.|.||.||..||||.|:|.:|
 Frog    31 QDFEKLRAQCLASGTLFKDEEFPACPSALGFNELGPGSPKTQGVIWKRPSEICPNPQFIVDGATR 95

  Fly   148 FDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLP 212
            .|::||.|||||||||.|:||.:::|..:|:|..|||:::|||||||||||||:||||::|||||
 Frog    96 GDIRQGALGDCWLLAAIASLTLDADLVAQVVPENQSFQKDYAGIFHFRFWQYGEWVDVVVDDRLP 160

  Fly   213 TYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPGNL 277
            |.||.|:::||.|.:||||||||||||||:||||||.||||.|..||||||::|.|:|::||.:|
 Frog   161 TKNGNLVFVHSAEGDEFWSALLEKAYAKLNGSYEALSGGSTIEGFEDFTGGIAEVYELRKAPSDL 225

  Fly   278 FTILQKAAERNSMMGCSIE-PDPNVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQGKIPMIRMR 341
            |.|:|||....|::||||: .:...|||.|.:.|::|||||:|..  .:::...||.|  :||:|
 Frog   226 FQIIQKALRAESLLGCSIDITNAYDTEAITSRKLVKGHAYSVTGA--EEVLYRGRQEK--LIRVR 286

  Fly   342 NPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPDSL 406
            |||| |.||.|||||::|||.||..:.||.:....| ||||||:|.|||..:.|:||||||||:|
 Frog   287 NPWG-EVEWTGPWSDTAPEWNYIDPKVKAALDKQSD-DGEFWMAFSDFLREYSRLEICNLSPDTL 349

  Fly   407 TEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEE----DEEGQCTV 467
            |..:|:    ||.:::|.|.|..|.|||||:|:..|||.|||:.|.|.|||.|    ::|..|||
 Frog   350 TNTEQH----KWNITLYNGSWARGSTAGGCQNYPATFWTNPQFRIKLDDPDHEHQGSNQEPCCTV 410

  Fly   468 IVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQ---GLNFFRYKSSVGRSPHFINTREV 529
            ||.|||||||.|:.||.:.|:||::::.: ..:|:|...   |.:||:...:..||..:||.|||
 Frog   411 IVGLMQKNRRRKKKMGEDLLSIGYSLFKI-PNQLQNHTDDHLGRDFFQKTPTAARSDTYINVREV 474

  Fly   530 CARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHVGYGGKADTITPGFPTPKPID 594
            ..||.||.|.||||||||:|.:.|:|.:|||||.:....|..|.|              ..||.:
 Frog   475 SNRFHLPVGDYLIVPSTFEPFKNGDFCLRVFSEKEAKSLEVGDVV--------------IAKPYE 525

  Fly   595 PQ------KEGLRRLFDSIAGKDMEVDWMELKRILDH--SMRDDLPKPVVFNRFSNNMAFETQAA 651
            |:      .:..:.:||.:||...|:|..||:.||:.  |.|.||                    
 Frog   526 PKISNKDVTDEFKNIFDKLAGDKEEIDAKELQTILNKLISKRPDL-------------------- 570

  Fly   652 GPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDETHGFSK 716
                                                                      .::||:.
 Frog   571 ----------------------------------------------------------RSNGFTV 577

  Fly   717 DVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLN 781
            :.||.|:::.|.|.:..|...||..|..:|.|:.||:...|.:.:|.:...:||.||..||:.||
 Frog   578 NTCREMISLQDMDGTATLSLLEFRILWLKIQKYLAIYLKADSDRSGTMDAHELRAALQEAGFTLN 642

  Fly   782 NRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKERDTEKNETATFTLEEWIERTI 841
            |::...:..||.|.:..|.||.||.|.::::|...:|:..|..|......:|:||:..|:
 Frog   643 NKIQQSIVLRYASDELTINFDSFIACMMRLETLFKMFQMLDKSKKGVVELSLQEWLCATL 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 166/301 (55%)
Calpain_III 418..565 CDD:279416 75/153 (49%)
EFh 719..765 CDD:238008 15/45 (33%)
capn8.1XP_031757616.1 Peptidase_C2 47..343 CDD:395523 166/301 (55%)
Calpain_III 355..515 CDD:238132 76/164 (46%)
EFh_PEF_CAPN8 536..702 CDD:320066 56/243 (23%)
Peptidase_C2 809..1106 CDD:395523
Calpain_III 1127..1268 CDD:395848
EFh_PEF 1298..1515 CDD:355382
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 361 1.000 Domainoid score I950
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 643 1.000 Inparanoid score I801
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm9483
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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