DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn12

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001104277.1 Gene:Capn12 / 60594 MGIID:1891369 Length:720 Species:Mus musculus


Alignment Length:802 Identity:278/802 - (34%)
Similarity:413/802 - (51%) Gaps:157/802 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QDYETILNSCLASGSLFEDPLFPASNESLQFSR-RPD----RHIEWLRPHEIAENPQFFVEGYSR 147
            |:||.|..:||.||.||.||.|||..::|.:.: .||    :.:||.||||....|||..|..||
Mouse    30 QNYEAIRRACLDSGILFRDPCFPAGPDALGYDKLGPDSEKAKGVEWKRPHEFCAEPQFICEDMSR 94

  Fly   148 FDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLP 212
            .||.||.||:||||||.|:||....|.:||:|..|.|::.|||:|||:.||:|:||||::||:||
Mouse    95 TDVCQGSLGNCWLLAAAASLTLYPRLLYRVVPPGQGFQDGYAGVFHFQLWQFGRWVDVVVDDKLP 159

  Fly   213 TYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPGNL 277
            ...|:||::.|.::||||:.||||||||||||||.::||...||..||||||.|...|::....:
Mouse   160 VREGKLMFVRSEQRNEFWAPLLEKAYAKLHGSYEVMRGGHMNEAFVDFTGGVGEVLYLRQNTPGV 224

  Fly   278 FTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHAYSIT---KVCLIDIVTPNRQG--KIPM 337
            |..|:.|..:.|::|.:...|..  |..|.:||::|||||:|   |:.|         |  |:.:
Mouse   225 FAALRHALAKESLVGATALSDRG--EIRTDEGLVKGHAYSVTGTHKMSL---------GFTKVRL 278

  Fly   338 IRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLS 402
            :|:||||| ..||:||||||.|.|..:|.|.:..: |....||||||..||||.||:.|:||:||
Mouse   279 LRLRNPWG-RVEWSGPWSDSCPRWDMLPSEWRDAL-LVKKEDGEFWMELQDFLTHFNTVQICSLS 341

  Fly   403 PDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEE----DEEG 463
            |:.|.......|   |.:.:::|.|..|..:||.:...:.||.|||:.:||::||||    ||||
Mouse   342 PEVLGPSPAGGG---WHIHIFQGRWVRGFNSGGSQPSAENFWTNPQFRLTLLEPDEEEDDDDEEG 403

  Fly   464 --------------------QCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELE----NR 504
                                :|||:::|:|:|||..|..|:..||:||.::.:.:..|:    .|
Mouse   404 PWGGWGAAGARGPARGGRVPKCTVLLSLIQRNRRCLRAKGLTYLTVGFHVFQIPEELLDLWDSPR 468

  Fly   505 PQGL--NFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNM 567
            .:.|  ...|...||     |...|:|..|.:|||||||:|||.....:|.:|.:|:|||..:..
Mouse   469 SRALLPGLLRADRSV-----FCARRDVSRRCRLPPGHYLVVPSASRVGDEADFTLRIFSERSHTA 528

  Fly   568 EENDDHVGYGGKADTITPGFPTPKPIDPQKEGLRRLFDSIAGKDMEVDWMELKRILDHSMRDDLP 632
            .|.||.:  ....|.:...:   ||::.:   |.:||..:||::.|::.::|:.::         
Mouse   529 VEIDDVI--SADLDALQAPY---KPLELE---LAQLFLELAGEEEELNALQLQTLI--------- 576

  Fly   633 KPVVFNRFSNNMAFETQAAG---PGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGD 694
                      ::|.|...|.   ||:.|...|                 |||       .:..| 
Mouse   577 ----------SIALEPARANTRTPGEIGLRTC-----------------EQL-------VQCFG- 606

  Fly   695 NPADGGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVE 759
                                               :..:|....|:.|...:..|:|.|..:|.:
Mouse   607 -----------------------------------RGQRLSLHHFQELWGHLMSWQATFDKFDED 636

  Fly   760 NTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKE--RD 822
            .:|.::..:||.||.:||:||||::...|..||.....::.|:.|:.||.::..   ||:.  :.
Mouse   637 ASGTMNSCELRLALTAAGFHLNNQLTQSLTSRYRDSRLRVDFERFVCCAARLTC---IFRHCCQH 698

  Fly   823 TEKNE-TATFTLEEWIERTIYS 843
            .:..| ....|.::|.|...:|
Mouse   699 LDGGEGVVCLTHKQWSEVATFS 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 146/305 (48%)
Calpain_III 418..565 CDD:279416 61/176 (35%)
EFh 719..765 CDD:238008 8/45 (18%)
Capn12NP_001104277.1 Peptidase_C2 46..339 CDD:279042 146/305 (48%)
Domain III 342..541 67/208 (32%)
Calpain_III 352..531 CDD:238132 62/186 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..415 7/21 (33%)
Domain IV 542..720 51/265 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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