DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capn10

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_009297070.1 Gene:capn10 / 570311 ZFINID:ZDB-GENE-110411-137 Length:649 Species:Danio rerio


Alignment Length:644 Identity:184/644 - (28%)
Similarity:276/644 - (42%) Gaps:147/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 LFEDPLFPASNESL------QFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLL 161
            :|.|..|||.:.||      ..|:..| .:.||||.||.:.||.|.:.......:||.|||||||
Zfish    10 MFVDLDFPADDPSLFWDYTTPLSKLLD-DVTWLRPQEICQQPQLFPDDPLEAHPKQGILGDCWLL 73

  Fly   162 AATANLTQESNLFFRVIPAEQSF--EENYAGIFHFRFWQYGKWVDVIIDDRLPTYNGELMYMHST 224
            .|.:.|.:..:|..:|.|.||..  :..|.|.|.|||||.|.|::|.:|||||..|..|.:....
Zfish    74 CACSMLLKNQHLLDKVFPPEQPLWGDSAYRGEFLFRFWQNGHWIEVRVDDRLPCINDNLCFSRCQ 138

  Fly   225 EKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLK--EAPGNLFTILQKAAE- 286
            ....||.|||||||||||||||.|..|..||||.|.:|.|:..:.:|  |:|       |:..: 
Zfish   139 SPRAFWVALLEKAYAKLHGSYEHLWAGQVCEAMVDLSGAVAVRWSIKDPESP-------QQPNDS 196

  Fly   287 --RNSMMGCSIEPDP-----------NVTEAET--PQGLIRGHAYSITKVCLID---IVTPNRQG 333
              ::::.|.|:...|           .|..|.|  |: |.:.||     :|:::   :.|...:|
Zfish   197 QIQHALHGLSVSDLPLELKERCAISCCVHSATTGFPE-LGQFHA-----MCVMEWTSVTTITGEG 255

  Fly   334 KIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEI 398
             :.:||:|||||..: |.|.|.:....|..: |...|:..|:....|||||...:||..||.|.:
Zfish   256 -VQLIRIRNPWGRRS-WAGVWRERGSGWASL-EASCAQTLLSRTAKGEFWMDEAEFLQEFDEVTV 317

  Fly   399 -CNLSP----------DSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIIT 452
             |.::.          :.||..||..|:           |..|.:|||||| ..||..||::.:.
Zfish   318 GCPVNDAGHLQSIYTGNFLTHSQQIGGR-----------WVKGYSAGGCRN-NSTFSSNPKFWLK 370

  Fly   453 LVDPDEEDEEGQCTVIVALMQKNRRSKRNMG-----MECLTIGFAIYSLNDRELENRPQGLNFFR 512
            :.:..|        |.::|:|..|......|     .:...|...::.:..:.          |.
Zfish   371 VCERGE--------VFLSLLQCRRAESPAEGAIQQHTQLQAIALHVWKVEKKH----------FN 417

  Fly   513 YKSSVGRSPHFIN-----TREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDD 572
            ...::.:.| |::     .|||.....|.||.||:|||||....||.|::||.|....::     
Zfish   418 LTRTLNKQP-FVSHAHAYDREVVVHTHLNPGFYLLVPSTFLQGAEGPFLLRVHSSCSTSL----- 476

  Fly   573 HVGYGGKADTITPGFPTPKPIDPQKE-------GLRRLFDSIAGKDMEVDWMELKRILDHSMRDD 630
                     ::....|:|..:..:.|       |...:..|..|.         :....|.:...
Zfish   477 ---------SVMKSSPSPLQLSSEGEWENICSHGSWSIGSSAGGS---------RNFTTHELNPR 523

  Fly   631 LPKPVVFNRFSNNMAFETQAAGP--------------GDDGAGAC---GLLSLI--CGP 670
            :...|:::...||:........|              .|.|:|:.   |::|.:  |.|
Zfish   524 VNLTVIYDPGGNNVRVTLHQNRPENSLHPIGFHIYKVPDGGSGSLLSPGVMSPVVSCVP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 119/325 (37%)
Calpain_III 418..565 CDD:279416 41/156 (26%)
EFh 719..765 CDD:238008
capn10XP_009297070.1 CysPc 11..317 CDD:238004 119/322 (37%)
calpain_III 337..477 CDD:214786 45/184 (24%)
Calpain_III 492..619 CDD:294111 16/100 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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