DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and capn1b

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_005174088.1 Gene:capn1b / 565106 ZFINID:ZDB-GENE-060503-491 Length:704 Species:Danio rerio


Alignment Length:771 Identity:329/771 - (42%)
Similarity:450/771 - (58%) Gaps:118/771 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QDYETILNSCLASGSLFEDPLFPASNESLQFSR-RPD----RHIEWLRPHEIAENPQFFVEGYSR 147
            ||||.:...|:.||.|||||.|||..:||.|.. .|:    |.::|:||.|::|||||.|.|.:|
Zfish    33 QDYEELRRECVESGRLFEDPCFPAVPQSLGFKELAPNSSKTRGVKWIRPTELSENPQFIVGGATR 97

  Fly   148 FDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLP 212
            .|:.||.|||||||||.|:||....|..||:|..|||...|||||||:|||:|:|||::||||||
Zfish    98 TDICQGALGDCWLLAAIASLTLNDKLLHRVVPHGQSFTNEYAGIFHFQFWQFGEWVDIVIDDRLP 162

  Fly   213 TYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPGNL 277
            ..:.|||::||.|.|||||||||||||||:||||||.||||.|..|||||||:|.|:|:.||.:|
Zfish   163 VKDKELMFVHSAEGNEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRSAPKDL 227

  Fly   278 FTILQKAAERNSMMGCSIEPDPNVT-----EAETPQGLIRGHAYSITKVCLIDIVTPNRQGKIPM 337
            ..|:.||.||.|::||||:    :|     ||.|.:.|::|||||:|.:..::.    |..:..:
Zfish   228 HRIIAKALERGSLLGCSID----ITSAFDMEAVTFKKLVKGHAYSVTALREVNF----RGNRERL 284

  Fly   338 IRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLS 402
            ||:||||| :.||.|.|||:|.||..|...::.|:....: |||||||||:|...|.|:|||||:
Zfish   285 IRIRNPWG-QVEWTGAWSDNSSEWNGIDPSEREELNNHME-DGEFWMSFQEFKRQFSRLEICNLT 347

  Fly   403 PDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLV--DPDEEDEEGQC 465
            ||:|::|.|:.    |....:.|.|..|.|||||||..:|||.||||.|||:  |.|.||.|..|
Zfish   348 PDALSDDSQHF----WNTIQFNGTWRKGSTAGGCRNNPNTFWINPQYKITLLEEDDDPEDNEVAC 408

  Fly   466 TVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGL--NFFRYKSSVGRSPHFINTRE 528
            |.:||||||:||..|..|.:..|||||:|.:.|..|.::...|  :||...||..||..|||.||
Zfish   409 TFMVALMQKDRRRFRKQGQDMHTIGFALYEVPDEFLGSQNVHLKKDFFLRHSSCARSETFINLRE 473

  Fly   529 VCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHVGYGGKADTITPGFPTPKPI 593
            |..|.:||||.||||||||:|.:|.:|::|||:|.|:..:|.||.:.:..:.:...    :.:.|
Zfish   474 VSTRLRLPPGEYLIVPSTFEPGKEADFVLRVFTEKQSETQEMDDEISFNLEDEEAV----SEENI 534

  Fly   594 DPQKEGLRRLFDSIAGKDMEVDWMELKRILDHSM---RDDLPKPVVFNRFSNNMAFETQAAGPGD 655
            |   ...:::|..::|:|||:...||:.||:..|   ||                          
Zfish   535 D---ASFKKMFAQLSGEDMEISVHELRTILNRVMTKHRD-------------------------- 570

  Fly   656 DGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDETHGFSKDVCR 720
                            ||                                     |.|||.:.||
Zfish   571 ----------------LK-------------------------------------TDGFSLESCR 582

  Fly   721 SMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVL 785
            .|:.::|.|.|.:||..||:.|.::|.||..:|:.:|::.:|.:|.:::|.|:.|||:.|||::.
Zfish   583 CMINLMDKDGSARLGIVEFQILWNKIRKWLGVFRQFDLDKSGTMSSYEMRLAVESAGFKLNNKLH 647

  Fly   786 NVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKERDTEKNETATFTLEEWIERTI 841
            .:|..||...| .|.||:|:.|.||::.....|||.:.|.:..|...:.||:..|:
Zfish   648 QILVARYSDGD-VIDFDNFVCCLVKLEAMFKSFKELEKEGSGVAELNISEWLYLTM 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 165/305 (54%)
Calpain_III 418..565 CDD:279416 79/150 (53%)
EFh 719..765 CDD:238008 17/45 (38%)
capn1bXP_005174088.1 Peptidase_C2 49..345 CDD:279042 165/305 (54%)
Calpain_III 359..510 CDD:279416 79/150 (53%)
PTZ00184 527..666 CDD:185504 53/225 (24%)
EFh 581..631 CDD:298682 18/49 (37%)
EFh 614..667 CDD:298682 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 358 1.000 Domainoid score I921
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 656 1.000 Inparanoid score I755
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm6388
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.870

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