DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capn7

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001128580.1 Gene:capn7 / 556792 ZFINID:ZDB-GENE-111111-1 Length:815 Species:Danio rerio


Alignment Length:732 Identity:151/732 - (20%)
Similarity:266/732 - (36%) Gaps:240/732 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRGFLRQAGQEFLNAA----GEAAMGAAKDVVGSVINEIFIKKEADTKRVLP-----SIKNMRVQ 59
            |:..|:|..::.|:.|    ...:..|::|..||..:    |..|..::..|     ||.: :.|
Zfish   132 LQAKLKQLARQALDRAEGLKDSVSKPASQDKPGSSAS----KGPAQVRQFFPLGPDFSIHD-KAQ 191

  Fly    60 PLQ-SQSNSTLYYGNLGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPD 123
            |:: :||:.........|:...|...|:|...|.:....:.....|..|: |.|::..:.:..|.
Zfish   192 PVRAAQSSEPQGQRYTAEEIEVLRKTSKVNGIEYVPFMSVDLRERFAFPV-PFSDKCGKLALSPK 255

  Fly   124 RHI---EWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFR------VIP 179
            :..   .|:||.:|..||. .:...|.|.::|..:.||..:|:.|........:.:      :.|
Zfish   256 QRAIFSRWVRPDDICNNPT-MIFTVSSFSIKQTVVSDCSFVASLAISAAYERRYSKKLITSIIYP 319

  Fly   180 AEQSFEENY--AGIFHFRFWQYGKWVDVIIDDRLPT-YNGELMYMHSTEKNEFWSALLEKAYAKL 241
            ..:..|..|  .|.:..:....|....|||||.||. .||||:..:|:.:||.|.:|:||||.|:
Zfish   320 QNRKGEPEYNPCGKYMVKLHINGVPRKVIIDDFLPVDRNGELLCSYSSNRNELWVSLIEKAYMKV 384

  Fly   242 HGSYEALKGGSTCEAMEDFTGGVSEWYDLKE-----APGNLFTILQKAAERNSMMGCSIEPDPNV 301
            .|.|: ..|.::...:...||.:.|...:..     ...:.|.:|.:...|..::   |.....|
Zfish   385 MGGYD-FPGSNSNIDLHALTGWIPERIAMHSDNQSFNKDDTFRMLYQRFHRGDVL---ITTATGV 445

  Fly   302 -TEAETPQ-GLIRGHAYSITKVCLIDIVTPNRQGKIP-MIRMRNPWGNEAEWNGPWSDSSPEWRY 363
             ||.|..: ||:..|||::     :||    ||.|.. .::::||| :...|.|.:|:.. |..:
Zfish   446 MTEEEGERWGLVPTHAYAV-----LDI----RQYKDKRFLQLKNPW-SHLRWKGSYSERD-EKNW 499

  Fly   364 IPEEQKAEIGLTFD-------RDGEFWMSFQDFLNHFDRV------------------------- 396
            .|:..|.   |.||       .:|.||:.::|...::|.:                         
Zfish   500 TPDLLKY---LNFDPKTAQKFDNGVFWIIWEDLCQYYDVIYLSWNPALFKESSCIHSSWDGKQGP 561

  Fly   397 --EICNLS----------------------------PDSLTEDQQ--------NSGKRKW----- 418
              ::.:|:                            .|...::::        .:||:.:     
Zfish   562 VKDVYSLANNPQYKLEVQCPQGGAAVWVLLTRHITDKDDFAQNREFITLVVYKTNGKKVYYPAEP 626

  Fly   419 ------------------------------EMSMYE----------------------------- 424
                                          .:|.||                             
Zfish   627 PPYIDGIRINSPHYLTKIKLTSPGTHTFTLVVSQYEKQNTINYTLRVYSVCKFNFSKIPTPFTNT 691

  Fly   425 ----GEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEEDEEGQCTVIVALMQKNRRSKR-NMGM 484
                |:| .|.:||||.|:.||:.:||.|.:.:..|.            .|:.:.|.|:: ::|.
Zfish   692 KRINGQW-KGASAGGCGNYKDTYKNNPIYQLNMEKPG------------PLLIELRGSRQYSVGF 743

  Fly   485 ECLTI---------GFAIYSLNDRELENRPQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHY 540
            |.:|:         ||...:..|...     |..:...:|                   ||.|.|
Zfish   744 EVVTVSTTGDSGSSGFQKRASGDYRC-----GFCYMEVES-------------------LPAGIY 784

  Fly   541 LIVPSTFDPNEEGEFII 557
            .::|:||.|.:||.|.:
Zfish   785 NVIPTTFLPKQEGPFFL 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 85/349 (24%)
Calpain_III 416..569 CDD:238132 39/220 (18%)
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
capn7NP_001128580.1 MIT 5..76 CDD:469712
MIT 85..159 CDD:469712 5/26 (19%)
CysPc 216..540 CDD:238004 88/343 (26%)
calpain_III 689..812 CDD:214786 36/150 (24%)
Blue background indicates that the domain is not in the aligned region.

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