DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and adgb

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_009293055.1 Gene:adgb / 555435 ZFINID:ZDB-GENE-041001-205 Length:1473 Species:Danio rerio


Alignment Length:713 Identity:129/713 - (18%)
Similarity:226/713 - (31%) Gaps:223/713 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MRVQPLQSQSNSTLYYGNLG-----EKSSSLG-PYSEVQDYETIL------NSCLASGSLFEDPL 108
            |...|.:..|.|:|...:.|     |.||.:| ..|.|:..::::      |....:...::.|.
Zfish     1 MSKTPKKKASASSLVASSPGHSPKKEASSLVGASESPVESKKSLISLWPEWNDTDVNAEKWDAPK 65

  Fly   109 FPASNESLQFSRRPDRHIE---------WLRPHE-IAENPQFFVEGYSRFDVQQGE--------- 154
            .|..::...   .|:..:|         |.||.| |.:.....||....||:....         
Zfish    66 TPKDSKLFD---DPEGKVELPSSLRIHTWKRPSEFILKKIPVVVENADTFDLTSANEHLFSSELM 127

  Fly   155 ---LGDCWLLAATANLTQESNLFFRVIPA-----EQSFEENYAGIFHFRFWQ-YGK--------- 201
               :.:|.:|....|..::..:....:|.     |..:....||..|...:. |||         
Zfish   128 RWIISECHILWKVCNTREDKVVSTETVPTLWKPWEHIYSLCKAGKDHMPLYNTYGKYVIKLYWLG 192

  Fly   202 -WVDVIIDDRLP-TYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCE-----AMED 259
             |..:.:||.|| ..:..|:...:|.::|.|..||.|...|: .|.:....||..|     .:..
Zfish   193 SWRKITVDDMLPFDKDNNLLLPATTNQSELWPMLLAKGILKV-ASTDTPVSGSGREFGEFTIIHC 256

  Fly   260 FTGGVSEWYDLKE-APGNLFTILQ------KAAERNSMMGCSIEPDPNVTEAET----------- 306
            .||.:.|...||. ..|.::..|:      :..|.:|....:| .|.||...::           
Zfish   257 LTGWIPEMIPLKSWYTGKIWDFLRDNVAQFQLEEESSEEKITI-TDSNVNNVQSKSPKSRATGSV 320

  Fly   307 PQ---------------------------------GLIRGHAYSITKVCLID--IVTPNRQGKIP 336
            ||                                 ||.:..::.:...|..|  :|.|.:...:|
Zfish   321 PQIVVCASYQPLHLMEKRTSMLTRMADSSESLRQYGLSQLFSHPVLLTCTRDCPLVAPPKTPPLP 385

  Fly   337 MIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNL 401
            ..::..|   ..:.|  .:|...|    |..||.|             .|.:..:.|...::..:
Zfish   386 QWKLIRP---RKQTN--ITDEPKE----PPVQKPE-------------QFIEVSSPFINFKLMTM 428

  Fly   402 SPDSLTEDQQNSGKRKWEMSMYEGEWT----------PGVTAGGCRNFLDTFWHNPQYIITLVDP 456
            |    ..|.::.|.:|   .||....|          ..:.....:|..:|...|....:...|.
Zfish   429 S----AHDMEHGGLKK---RMYNSNLTSFSEMEDTEDEHIQNDNIQNSTNTLQTNENTQVPAEDK 486

  Fly   457 DEE-----DEEGQCTVIVALMQKNRRSKRNM--GMECLTIGFAIYSLNDRELENRP--------- 505
            .::     |.||..:......:.:|:.|..:  |.|.   ...:....|....|:|         
Zfish   487 KKDNSIANDTEGVESTAAPDKETDRKDKEKVQTGKES---SAGLLQSQDALASNKPLLLKTWVDL 548

  Fly   506 -------QGLNFF--------RYKSSVGRSPHFINTREVCARFKLPPGHYLI--------VPSTF 547
                   |.|..|        ::|:|     ||.|:  :.:|.......|.:        :|...
Zfish   549 HNFTKCFQTLLIFHKPNMYPHQFKTS-----HFTNS--ISSRLSAAALSYTVASTHSVAALPKQS 606

  Fly   548 D-------PNEEGEFIIRVFSETQNNMEENDDHVGYGG-----------KADTITPGFPTPKP 592
            |       .:.:|:....:|::   |:...:..:|:..           |..:..||..|.||
Zfish   607 DLTGNIHTQSADGKGTYFLFAD---NLLSTEIVIGFSALVHWGESVEERKESSTRPGSLTAKP 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 73/392 (19%)
Calpain_III 416..569 CDD:238132 33/208 (16%)
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
adgbXP_009293055.1 CysPc 72..>269 CDD:469591 43/200 (22%)
Adgb_C_mid-like 712..1114 CDD:412094
globin helix C 713..719 CDD:412094
globin helix D 728..733 CDD:412094
globin helix E 735..755 CDD:412094
globin helix F 766..774 CDD:412094
globin helix G 780..798 CDD:412094
globin helix H 807..830 CDD:412094
IQ motif 851..869 CDD:412094
globin helix A 878..894 CDD:412094
globin helix B 895..908 CDD:412094
CR6_interact <1387..1447 CDD:431088
Blue background indicates that the domain is not in the aligned region.

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