DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capns1a

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001017899.2 Gene:capns1a / 550598 ZFINID:ZDB-GENE-030113-3 Length:216 Species:Danio rerio


Alignment Length:286 Identity:72/286 - (25%)
Similarity:117/286 - (40%) Gaps:97/286 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 GGKADTI--------TPGFPTP--KPI-------DPQKEGLRRLFDSIAGKDMEVDWMELKRILD 624
            ||..|.|        .|..|.|  :|:       ..:::..|::|:.:||.||||...||..||:
Zfish     9 GGVIDVIGNIDPNQFVPSEPPPPRRPLAYAVSNESAEEQQFRKVFNQLAGDDMEVSPTELMNILN 73

  Fly   625 H--SMRDDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQS 687
            .  |...||                                                        
Zfish    74 KIISKHGDL-------------------------------------------------------- 82

  Fly   688 NKRLIGDNPADGGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAI 752
                                  :|.||:.:.||||||::|:|.:|||||.||:.|.:.|.||:.|
Zfish    83 ----------------------KTDGFTIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIKKWQGI 125

  Fly   753 FKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDI 817
            :|.||.:::|.:...:|..|..:||:.|.:::..::..||....|.:.||::|.|.|::......
Zfish   126 YKTYDRDHSGTIGADELPAAFRAAGFPLTDQLFQMIIRRYSDESGNMDFDNYIGCLVRLDAMCHA 190

  Fly   818 FKERDTEKNETATFTLEEWIERTIYS 843
            ||..|.:.:.|....::||::.|:||
Zfish   191 FKTLDKDNDGTIKVNVQEWLQLTMYS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889
Calpain_III 416..569 CDD:238132
EFh_PEF_CalpA_B 600..843 CDD:320071 62/244 (25%)
EF-hand motif 600..627 CDD:320071 12/28 (43%)
EF-hand motif 717..747 CDD:320071 16/29 (55%)
EF-hand motif 748..778 CDD:320071 10/29 (34%)
EF-hand motif 784..812 CDD:320071 8/27 (30%)
EF-hand motif 813..843 CDD:320071 7/29 (24%)
capns1aNP_001017899.2 EFh_PEF_CPNS1_2 48..216 CDD:320063 62/245 (25%)
EF-hand motif 48..76 CDD:320063 12/27 (44%)
EF-hand motif 90..120 CDD:320063 16/29 (55%)
EF-hand motif 121..151 CDD:320063 10/29 (34%)
EF-hand motif 157..185 CDD:320063 8/27 (30%)
EF-hand motif 186..216 CDD:320063 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.

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