DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn15

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001334263.1 Gene:Capn15 / 50817 MGIID:1355075 Length:1196 Species:Mus musculus


Alignment Length:548 Identity:148/548 - (27%)
Similarity:216/548 - (39%) Gaps:131/548 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 YETILNSCLASGSLFEDPLFPASNESLQF---SRRPDRHIEWLRPHEIAENPQFFVE---GYSRF 148
            :|.|:..|..:...|.|..||....|:.|   .....|..:|||||||  |...|.:   .:|.|
Mouse   550 WENIVAFCRENSVNFVDDSFPPGPASVGFPVGDSVQQRVKQWLRPHEI--NCSVFRDHGTPWSVF 612

  Fly   149 ------DVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVII 207
                  |:.||.||:||.|:|.|.|.:..:|..||:.......|   |.:..|..:.|.|..|::
Mouse   613 HTLRPSDILQGLLGNCWFLSALAVLAERPDLVERVMVTRSLCAE---GAYQVRLCKDGTWTTVLV 674

  Fly   208 DDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKE 272
            ||.||......:.....::.:.|.||:|||.|||||||.||:.|...|.:...||...|...|:.
Mouse   675 DDMLPCDEAGFLLFSQAQRKQLWVALIEKALAKLHGSYFALQAGRAIEGLATLTGAPCESLALQV 739

  Fly   273 APGN----------LFTILQKAAERNSMMGCS-----IEPDPNVTEAETPQGLIRGHAYSITKVC 322
            :..|          ::..:..:.|...:||.|     ::.|....|:   .||...||||:..| 
Mouse   740 SSTNPREEPVDTDLIWAKMLSSKEAGFLMGASCGGGNMKVDDAAYES---LGLRPRHAYSVLDV- 800

  Fly   323 LIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQ 387
             .|:     ||. .::|:||||| ...|||.|||..|.|   |...:||:......:|.|||.:.
Mouse   801 -RDV-----QGS-RLLRLRNPWG-RFSWNGSWSDEWPHW---PGHLRAELMPHGSSEGVFWMEYS 854

  Fly   388 DFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIIT 452
            ||:.:||.|:||.:..|             |:.:..:|.:..  ||||           |..:..
Mouse   855 DFIRYFDSVDICKVHSD-------------WQEARVQGCFPS--TAGG-----------PVGVTA 893

  Fly   453 LVDPDEEDEEGQCTVIVALMQKNRRSKRNMGME----CLTIGFAIYSLNDRELENRPQGLNFFRY 513
            |...:....|      .||.|:..|...::...    |:.:..|.:....|              
Mouse   894 LTVLERASLE------FALFQEGSRRSDSVDSHLLDLCILVFRATFGTGGR-------------- 938

  Fly   514 KSSVGRSPHFINTREVCARF-----KLPPGHYLIVPSTFD------PNEEGEFIIRVFSETQNNM 567
             .|:||.  ..:::....:|     .|.||.|.:|...|:      |....:             
Mouse   939 -LSLGRL--LAHSKRAVKKFVNCDVMLEPGEYAVVCCAFNHWNPAPPGPPAQ------------- 987

  Fly   568 EENDDHVGYGGKADTITPGFPTPKPIDP 595
                   |.|......||.|||.:|..|
Mouse   988 -------GKGPSQMRPTPSFPTSEPQSP 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 107/322 (33%)
Calpain_III 418..565 CDD:279416 27/161 (17%)
EFh 719..765 CDD:238008
Capn15NP_001334263.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.