DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capn5

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001006736.1 Gene:capn5 / 448405 XenbaseID:XB-GENE-947203 Length:642 Species:Xenopus tropicalis


Alignment Length:663 Identity:236/663 - (35%)
Similarity:350/663 - (52%) Gaps:107/663 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVE 143
            ||..|:.. |.|:.:...|.:...|||||:|||:|::|.:..:..:.::|.||.|...:|..||:
 Frog     3 SSAKPFGN-QQYQALKKECQSKKVLFEDPVFPANNDALFYKTQRVQGVQWKRPKEFCTDPHLFVD 66

  Fly   144 GYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIP--AEQSF----EENYAGIFHFRFWQYGKW 202
            |.|..|:.||::|:||.:||.::|.....|:.:|||  .||.:    .:.|||||||.||::|:|
 Frog    67 GISSHDLHQGQVGNCWFIAACSSLASREQLWQKVIPDWKEQEWYADKPQIYAGIFHFHFWKFGEW 131

  Fly   203 VDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEW 267
            |||:|||||||.|.:|:|.||.||||.|.||:|||||||.|.||||.||:|.:|:.||||||||.
 Frog   132 VDVVIDDRLPTINNQLIYCHSNEKNELWCALVEKAYAKLAGCYEALDGGNTADALVDFTGGVSEP 196

  Fly   268 YDLKEA--------PGNLFTILQKAAERNSMMGCSIE-PDPNVTEAETPQGLIRGHAYSITKVCL 323
            .:|.|.        ..:||..:.|...|..::.|||. ...:..||....||::||||::|.|..
 Frog   197 IELTEGHFVTDVEKRNDLFERVLKVHNRGGLISCSIRATSASDMEARMACGLVKGHAYAVTDVRK 261

  Fly   324 I----DIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWM 384
            :    .::...:..|:.||||||||| |.||||||||||.||:.:.:.::.::|:|.:.||||||
 Frog   262 VRLGHGLLAFFKSEKLEMIRMRNPWG-EREWNGPWSDSSEEWQKVSKSEREKLGVTVEDDGEFWM 325

  Fly   385 SFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGV-----TAGGCRNFLDTFW 444
            :|:||..::..:.:|.|...|..     |..:.||.::....|....     .:|||.||..|:.
 Frog   326 TFEDFCKYYTDIIMCRLINTSYL-----SIHKTWEEAVLRSSWVQHQDPLQNRSGGCLNFKATYL 385

  Fly   445 HNPQYIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMG-MECLTIGFAIYSLNDRELENRPQGL 508
            .|||::..:..|::|       |:|.|.||.:|:.|..| .|.|.|||.|:.:   ||..|    
 Frog   386 QNPQFVFDVKKPEDE-------VLVCLQQKTKRTTRQEGKAENLAIGFEIHQV---ELNRR---- 436

  Fly   509 NFFRYKSSVGR--SPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEEND 571
              ||..:...:  |..:||:|.|..|..|..|.|:|:|:||||...|||::|||::..:|..|. 
 Frog   437 --FRMHTLQPKVASSIYINSRCVFLRTDLKEGRYVIIPTTFDPGHTGEFLLRVFTDLPSNCCEL- 498

  Fly   572 DHVGYGGKADTITP-------GFP--TPKPIDPQKEGLRRLFDSIAGKDMEV------------- 614
                   |.|..|.       |:|  ..:......:||::. ||..|.|..|             
 Frog   499 -------KLDEPTKTCWSGLCGYPQLVSQVHVVSAQGLKQQ-DSNGGADPYVIISCEGNKVQSPV 555

  Fly   615 --DWMELK------------------RILDHS-MRDDLPKPVVFNRFSNNM----AFETQAAGPG 654
              |.::.|                  ::.:|: ::|:....||.:..:||:    :.|.|..|..
 Frog   556 IKDCLDPKFNVKGVFYRKKPGQPIVVQVWNHNVIKDEFMGLVVLSGDANNLQTQHSLELQDKGNK 620

  Fly   655 DDGAGACGLLSLI 667
            ..|. ..|.::|:
 Frog   621 KSGT-VSGTINLV 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 143/314 (46%)
Calpain_III 418..565 CDD:279416 54/154 (35%)
EFh 719..765 CDD:238008
capn5NP_001006736.1 Peptidase_C2 27..341 CDD:395523 143/314 (46%)
Calpain_III 362..488 CDD:395848 50/141 (35%)
C2_Calpain 515..640 CDD:176011 22/120 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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