DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and capn2

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_031757476.1 Gene:capn2 / 448035 XenbaseID:XB-GENE-993758 Length:703 Species:Xenopus tropicalis


Alignment Length:807 Identity:326/807 - (40%)
Similarity:454/807 - (56%) Gaps:161/807 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 LGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRH------IEWLRPH 132
            ||....:| ||.. ||||.:.|.||.||:||:|..|||.:.||.| :...:|      :.|.||.
 Frog    18 LGTNEKAL-PYLS-QDYEALRNECLQSGTLFKDLSFPAIHSSLGF-KELGQHSAKCQGVVWKRPK 79

  Fly   133 EIAENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFW 197
            ::..:|||...|.:|.|:.||.|||||||||.|:||....:..||:|.:|||:|||||||||:||
 Frog    80 DLCPDPQFIAGGATRTDICQGALGDCWLLAAIASLTLNEQILSRVVPKDQSFQENYAGIFHFQFW 144

  Fly   198 QYGKWVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTG 262
            |||:||||:|||||||.:|:|:::||.|.:||||||:|||||||:||||||.||:|.|..|||||
 Frog   145 QYGEWVDVVIDDRLPTKDGKLLFVHSAEGSEFWSALMEKAYAKLNGSYEALSGGTTTEGFEDFTG 209

  Fly   263 GVSEWYDLKEAPGNLFTILQKAAERNSMMGCSIE-PDPNVTEAETPQGLIRGHAYSITKVCLIDI 326
            |::|||:|::||.|||.|:|||....|::||||: .....|||.|.|.|::|||||:|....:..
 Frog   210 GLAEWYELRKAPPNLFKIIQKALRTGSLLGCSIDITSAAETEAITFQKLVKGHAYSVTAAEEVQY 274

  Fly   327 VTPNRQGKI-PMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFL 390
                 :|.: .:||:||||| |.||.|.|||:|.||..:..:.:.::....| ||||||||.|||
 Frog   275 -----RGNLEKLIRIRNPWG-EVEWTGAWSDNSSEWNSVDPDVREKLIKRCD-DGEFWMSFNDFL 332

  Fly   391 NHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITL-- 453
            .::.|:|||||:||:|..|:.:    ||.::..:|.|..|.||||||||.:|||.||||:|.|  
 Frog   333 RNYSRLEICNLTPDTLASDKYS----KWSLTKMDGTWRRGSTAGGCRNFPETFWMNPQYVIKLEE 393

  Fly   454 VDPDEEDEEGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSL-------------NDRELENRP 505
            .|.|.:|.|..||.||.|:|||||.:|.||.:..|||||||.:             .|..|.|: 
 Frog   394 ADDDPDDNEEGCTFIVGLIQKNRRKQRKMGEDMHTIGFAIYEVPPQLTGQKDIRLSRDYILRNK- 457

  Fly   506 QGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEEN 570
                 .|.||..     :||.|||..||:||||.|:|:||||:|::.|:|.:|||||  .|.|..
 Frog   458 -----IREKSDT-----YINLREVLNRFRLPPGEYVILPSTFEPHKVGDFCLRVFSE--KNAESK 510

  Fly   571 ------DDHVGYGGKA--------DTITPGFPTPKPIDPQKEGLRRLFDSIAGKDMEVDWMELKR 621
                  ||.:    ||        |.|.|.|             :|:|.::||.|.|:...||..
 Frog   511 CQDRVPDDEI----KADIDEDVNEDAIDPNF-------------KRMFLALAGDDKEISPHELFN 558

  Fly   622 ILDH--SMRDDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMN 684
            ||..  |.|:|:                                                     
 Frog   559 ILQKVISKREDI----------------------------------------------------- 570

  Fly   685 DQSNKRLIGDNPADGGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKW 749
                                     ::.|||.:.||::|.:||:|.:||||.:||:.|.::|.|:
 Frog   571 -------------------------KSDGFSIETCRTIVDLLDSDGTGKLGLKEFKILWTKILKY 610

  Fly   750 KAIFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTY 814
            :.|:...|.:::|.::.:::|.||.:||..:|:.:..:|..|:...|..|.||:|:.|.::::..
 Frog   611 QKIYSSVDRDHSGTINSYEMRGALEAAGIKVNSTINELLVARFADEDHTIDFDNFVRCLLRLEIM 675

  Fly   815 IDIFKERDTEKNETATFTLEEWIERTI 841
            ..||.:.||||....|..::.|:..|:
 Frog   676 FKIFNQMDTEKTGVVTLKMDTWLSLTV 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 160/303 (53%)
Calpain_III 418..565 CDD:279416 76/161 (47%)
EFh 719..765 CDD:238008 18/45 (40%)
capn2XP_031757476.1 Peptidase_C2 46..342 CDD:395523 160/303 (53%)
Calpain_III 363..502 CDD:395848 71/149 (48%)
EFh_PEF 537..703 CDD:355382 58/257 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 361 1.000 Domainoid score I950
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 643 1.000 Inparanoid score I801
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm9483
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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