DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capn3a

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_017207114.1 Gene:capn3a / 447832 ZFINID:ZDB-GENE-040912-97 Length:733 Species:Danio rerio


Alignment Length:808 Identity:328/808 - (40%)
Similarity:464/808 - (57%) Gaps:135/808 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSR-----RPDRHIEWLRPHEI 134
            ||.|.|.......|||..:....|...:||||..|||:.:||.:..     ...::|.|.||.||
Zfish    22 GEGSLSKPIRFSGQDYTLLKQEYLQKKTLFEDETFPATVDSLGYKELGHKSNKVKNIVWKRPKEI 86

  Fly   135 AENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQY 199
            .:||||.|.|.||.|:.||:|||||||||.|.||....|.:||||.||||.|.|||||||:||:|
Zfish    87 CDNPQFIVGGASRTDICQGDLGDCWLLAAIACLTLNDKLLYRVIPQEQSFSEQYAGIFHFQFWRY 151

  Fly   200 GKWVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGV 264
            |.||||::|||:||:|.:|::..|.|:|||||||||||||||||||||||||:|.|.||||||||
Zfish   152 GDWVDVVVDDRIPTFNNQLVFTKSAERNEFWSALLEKAYAKLHGSYEALKGGNTAEGMEDFTGGV 216

  Fly   265 SEWYDLKEAPGNLFTILQKAAERNSMMGCSIEP-DPNVTEAETPQGLIRGHAYSITKV--CLIDI 326
            :|:|::||||..|:.|:|||.||.|:|||||:. .|...|..|..||::|||||:|.|  |.   
Zfish   217 TEFYEMKEAPKELYKIMQKALERGSLMGCSIDSLVPARFETRTATGLVKGHAYSVTAVEECK--- 278

  Fly   327 VTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLN 391
            .:..::.::.::|:||||| :.||||||||:|.||..:.:.:|.::......||||||||:||..
Zfish   279 QSQQKESRVRLVRLRNPWG-QVEWNGPWSDNSKEWESLSKAEKEKLQQQNAEDGEFWMSFEDFKK 342

  Fly   392 HFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLV-- 454
            ::.::|||||:||:|.:|:.:    ||.:|:.||.|..|.:||||||:.||||.||||.:.|:  
Zfish   343 NYTKIEICNLTPDALEDDKLH----KWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEE 403

  Fly   455 DPDEEDEEGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGL--NFFRYKSSV 517
            |.|.||:|..||.:|||||||||.:|.:|...|||||:||.: .:|:....|.:  .||...::.
Zfish   404 DDDPEDDEVACTFVVALMQKNRRKERKLGANLLTIGFSIYEV-PKEMHGNKQHMQKEFFMSTTAK 467

  Fly   518 GRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHVGYGGKADT 582
            .||..:||.|||..||:|.||.|:|:||:::|::|||||:|||||.:|..||.::.:    :|| 
Zfish   468 ARSRAYINLREVTQRFRLSPGEYVIIPSSYEPHQEGEFILRVFSEKRNTSEEIENRI----EAD- 527

  Fly   583 ITPGFPTPKPIDPQKEG-----LRRLFDSIA------------GKDMEVDWMELKRILDH--SMR 628
                .|.|.|....:|.     ...:|..||            |.:|||...|||.:|:.  |..
Zfish   528 ----HPVPSPASTGEESEEDQQFLSIFQHIAGDVSTGEAVSAWGSNMEVSANELKDVLNKVVSKH 588

  Fly   629 DDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIG 693
            .|:                                                              
Zfish   589 KDI-------------------------------------------------------------- 591

  Fly   694 DNPADGGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDV 758
                            .|..||::.||||:|::|.|.:|:|..:||..|.::|.:|:.|||.||.
Zfish   592 ----------------HTESFSRECCRSMIALMDMDGTGRLNLQEFRQLWNKIKQWQEIFKRYDF 640

  Fly   759 ENTGRVSGFQLREALNSA--------GYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYI 815
            ::...:|.:::|.|:|.|        |:.|||::.:::..||.:....:.|:.||.|.|:::...
Zfish   641 DHNDTISSYEMRNAINDAVTCLVCHSGFRLNNQLYDIITMRYANESMNVDFESFISCLVRLEGMF 705

  Fly   816 DIFKERDTEKNETATFTLEEWIERTIYS 843
            ..|:..|...:.:...::.||::.|:|:
Zfish   706 RAFQAFDQCGDGSIRLSVLEWLQLTMYA 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 168/303 (55%)
Calpain_III 416..569 CDD:238132 79/156 (51%)
EFh_PEF_CalpA_B 600..843 CDD:320071 56/264 (21%)
EF-hand motif 600..627 CDD:320071 11/40 (28%)
EF-hand motif 717..747 CDD:320071 12/29 (41%)
EF-hand motif 748..778 CDD:320071 11/37 (30%)
EF-hand motif 784..812 CDD:320071 7/27 (26%)
EF-hand motif 813..843 CDD:320071 5/29 (17%)
capn3aXP_017207114.1 Peptidase_C2 51..351 CDD:459889 168/303 (55%)
Calpain_III 371..510 CDD:460050 71/139 (51%)
EFh_PEF 545..733 CDD:355382 56/265 (21%)
EF-hand motif 545..585 CDD:320054 11/39 (28%)
EF-hand motif 600..629 CDD:320054 12/28 (43%)
EF-hand motif 630..667 CDD:320054 11/36 (31%)
EF-hand motif 674..702 CDD:320054 7/27 (26%)
EF-hand motif 704..732 CDD:320054 5/27 (19%)

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