DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn13

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001020304.1 Gene:Capn13 / 362701 RGDID:1562682 Length:668 Species:Rattus norvegicus


Alignment Length:775 Identity:225/775 - (29%)
Similarity:351/775 - (45%) Gaps:144/775 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QDYETILNSCLASGSLFEDPLFPASNES-----LQFSRRPDRHIEWLRPHEIAEN-PQFFVEGYS 146
            ||:..:.:.||:.|.||.|..|||...|     |...|.|  .:||.||.:::.. |.|.:||.|
  Rat    19 QDFRFLRDRCLSRGQLFIDDTFPAEASSIGQKLLMGKRLP--KLEWKRPQDLSFGPPHFILEGAS 81

  Fly   147 RFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRL 211
            |||:|||..||||.|||..:|||......::: ..|||...|||||||||||.|:||:|:|||||
  Rat    82 RFDIQQGRAGDCWFLAALGSLTQNPQCLQKIL-MNQSFSYQYAGIFHFRFWQCGQWVEVVIDDRL 145

  Fly   212 PTYNGELMYMHSTEKN-EFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPG 275
            |.......::|....| |||..|:|||||||.|||..|..|...:|:.|.||||....:|..:|.
  Rat   146 PVVGNNFCFVHPRRGNQEFWPCLMEKAYAKLLGSYSQLHYGYLPDALVDLTGGVVTRINLHSSPS 210

  Fly   276 NLFTILQKAAERNSMMGCSIEPDPNVTEAETPQ-GLIRGHAYSITKVCLIDIVTPNRQGKIPMIR 339
            :|..:::.|.:..||:.|: .|.....|:|..: ||:..|||::|....|..    |:|...:||
  Rat   211 DLLMVVKTAVQTGSMVACA-TPKWLTEESEVMENGLVSQHAYTVTGAEKIQY----RRGWEEIIR 270

  Fly   340 MRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPD 404
            :.||||| .||.|.|.|.|.||......:|:::....| |||||||.:||..:|..:.||:..| 
  Rat   271 LWNPWGN-TEWRGRWGDGSQEWWETHGSRKSQLYENKD-DGEFWMSCRDFHENFSCLYICSQFP- 332

  Fly   405 SLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEEDEEGQCTVIV 469
             :|.|...:....|....::.:...|.||||....:       ||:..:.:|.:.:     .|||
  Rat   333 -ITMDPGVTPNESWRQMRFKNQVISGNTAGGDGRDI-------QYLFDVQEPMDGN-----NVIV 384

  Fly   470 A--LMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGL--NFFRYKSSVGRSPHFINTREVC 530
            |  :|.::.:::.    ....:.|.::.: |.:.:...:.|  .||.......:...::..|...
  Rat   385 AFTVMPQSLKTEE----WPFPLQFQVFKV-DSQFQKFQKRLPPAFFSQFRDAAQGIDYVTKRNFT 444

  Fly   531 ARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHVGYGGKADTITPGFPTPKPIDP 595
            ..|.|.||.|::|.|..  .:|.||::|:|.:..:                         |..:|
  Rat   445 KSFHLSPGTYVVVASAH--GKEVEFLLRIFLKMPH-------------------------KDRNP 482

  Fly   596 QKEGLRRLFDSIAGKDMEVDWMELKRILDHSMRDDLPKPVVFNRFSNNMAFETQAAGPGDDG--A 658
            ...                  ..||.:......::.||. .|:|:.             |.|  .
  Rat   483 NSS------------------FNLKALKGSLSENESPKS-SFHRYM-------------DQGLDI 515

  Fly   659 GACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDETHGFSKDVCRSMV 723
            .|..|.||:...:|.|.|                ||.                  ||.|.|:|::
  Rat   516 DASQLQSLLNQEYLTGPP----------------GDT------------------FSLDQCQSIM 546

  Fly   724 AMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNS----AGYHLNNRV 784
            |::|...:|:|..|||..|.|.:...:.:|: :...:.|.:....|.|.:.|    :|..|:..:
  Rat   547 ALMDLKVNGRLDREEFARLQSRLIHCQHVFQ-HIQRSQGVLRSSDLWEVIESTDFLSGVLLSKEL 610

  Fly   785 LNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKERDTEKNETATFTLE-EWIERTIYS 843
            |:::..||....|:::|...:...::::|....|  |:..|:..:.:..| ||::..:||
  Rat   611 LSLMTLRYSDSSGRLSFPSLVCFLIRLETMSKAF--RNLSKDGKSIYLTEMEWMKLVMYS 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 129/303 (43%)
Calpain_III 418..565 CDD:279416 32/150 (21%)
EFh 719..765 CDD:238008 13/45 (29%)
Capn13NP_001020304.1 Peptidase_C2 35..329 CDD:279042 129/303 (43%)
Calpain_III 345..477 CDD:294111 32/150 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.880

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