DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and Capn7

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001025208.1 Gene:Capn7 / 306260 RGDID:1304855 Length:813 Species:Rattus norvegicus


Alignment Length:637 Identity:134/637 - (21%)
Similarity:219/637 - (34%) Gaps:255/637 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 CLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLL 161
            |...|.|   ||.|  .:...||:       |:||.::..||. .:...|.|.::|..:.||..:
  Rat   242 CDRLGKL---PLSP--KQKATFSK-------WVRPEDLTNNPT-MIYTVSSFSIKQTIVSDCSFV 293

  Fly   162 AATANLTQESNLFFR------VIPAEQSFEENY--AGIFHFRFWQYGKWVDVIIDDRLPT-YNGE 217
            |:.|........|.:      :.|..:..|..|  .|.:..:....|....|||||:||. :.||
  Rat   294 ASLAISAAYERRFNKKLITSIIYPQNKDGEPEYNPCGKYMVKLHLNGVPRKVIIDDQLPVDHKGE 358

  Fly   218 LMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKE-----APGNL 277
            |:..:|..|:|.|.:|:||||.|:.|.|: ..|.::...:...||.:.|...:..     :..:.
  Rat   359 LLCSYSNNKSELWVSLIEKAYMKVMGGYD-FPGSNSNIDLHALTGWIPERIAMHSDSQTFSKDSS 422

  Fly   278 FTILQKAAERNSMM-----GCSIEPDPNVTEAETPQ-GLIRGHAYSITKVCLIDIVTPNRQGK-I 335
            |.:|.:...:..::     |.       :||||..: ||:..|||::     :||    |:.| :
  Rat   423 FRMLYQRFHKGDVLITASTGM-------MTEAEGEKWGLVPTHAYAV-----LDI----REFKGL 471

  Fly   336 PMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFD-------RDGEFWMSFQDFLNHF 393
            ..|:::||| :...|.|.:|::..: .:.||.||.   |.||       .:|.||:|:.|...::
  Rat   472 RFIQLKNPW-SHLRWKGRYSENDVK-NWTPELQKY---LNFDPRTAQKIDNGIFWISWDDLCQYY 531

  Fly   394 DRV------------------------------EICNLSPDSLTEDQ------------------ 410
            |.|                              .:.| :|....|.|                  
  Rat   532 DVVYLSWNPALFKESTCIHSTWDAKQGPVKDAYSLAN-NPQYKLEVQCPQGGAAVWVLLSRHITD 595

  Fly   411 ----------------QNSGKRKW-----------------------------------EMSMYE 424
                            :..||:.:                                   .:|.||
  Rat   596 KDDFANNREFITMVVYKTDGKKVYYPADPAPYIDGIRINSPHYLTKIKLTTPGTHTFTLVVSQYE 660

  Fly   425 ---------------------------------GEWTPGVTAGGCRNFLDTFWHNPQYIITLVDP 456
                                             |:|: |.:||||.||.:|..:||.|...:   
  Rat   661 KQNTIHYTVRVYSACSFTFSKIPSPYTLSKRINGKWS-GQSAGGCGNFQETHKNNPIYQFHI--- 721

  Fly   457 DEEDEEGQCTVIVALMQKNRRSKRNMGMECLTI---------GFAIYSLND-------RELENRP 505
               |:.|.     .|::.....:.::|.|.:.:         ||...|..|       .||||  
  Rat   722 ---DKTGP-----LLIELRGPRQYSVGFEVVAVSIAGDPGPHGFQRKSSGDYRCGFCYLELEN-- 776

  Fly   506 QGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFII 557
                                         :|.|.:.::||||.|.:||.|.:
  Rat   777 -----------------------------IPAGIFNVIPSTFLPKQEGPFFL 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 86/353 (24%)
Calpain_III 418..565 CDD:279416 39/224 (17%)
EFh 719..765 CDD:238008
Capn7NP_001025208.1 MIT_calpain7_1 5..76 CDD:239144
MIT 85..157 CDD:412291
CysPc 214..538 CDD:238004 89/330 (27%)
calpain_III 687..810 CDD:214786 36/156 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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