DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn2

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_058812.1 Gene:Capn2 / 29154 RGDID:2268 Length:700 Species:Rattus norvegicus


Alignment Length:793 Identity:327/793 - (41%)
Similarity:461/793 - (58%) Gaps:133/793 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 EKSSSLGPYSEV-----QDYETILNSCLASGSLFEDPLFPASNESLQFSR-----RPDRHIEWLR 130
            |.:..||.:...     |||||:.|.||.:|:||:||.|||...||.|..     ...|.|||.|
  Rat    13 EAAEGLGSHERAIKYLNQDYETLRNECLEAGALFQDPSFPALPSSLGFKELGPYSSKTRGIEWKR 77

  Fly   131 PHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFR 195
            |.||..:|||.:.|.:|.|:.||.|||||||||.|:||....:..||:|.:|||:|||||||||:
  Rat    78 PTEICADPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPLDQSFQENYAGIFHFQ 142

  Fly   196 FWQYGKWVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDF 260
            |||||:||:|::||||||.:|||:::||.|.:|||||||||||||::|.||||.||:|.|..|||
  Rat   143 FWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDF 207

  Fly   261 TGGVSEWYDLKEAPGNLFTILQKAAERNSMMGCSIEPDPNVT-----EAETPQGLIRGHAYSITK 320
            |||::|||:|::.|.|||.|:|||.|:.|::||||:    :|     ||.|.|.|::|||||:|.
  Rat   208 TGGIAEWYELRKPPPNLFKIIQKALEKGSLLGCSID----ITSAADSEAVTYQKLVKGHAYSVTG 268

  Fly   321 VCLIDIVTPNRQGKI-PMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWM 384
            ...::     ..|.: .:||:||||| :.||.|.|:|:.|.|..:..|.:|.: .....||||||
  Rat   269 AEEVE-----SSGSLQKLIRIRNPWG-QVEWTGKWNDNCPSWNTVDPEVRANL-TERQEDGEFWM 326

  Fly   385 SFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQY 449
            ||.|||.|:.|:|||||:||:||.|..    :||:::..:|.|..|.|||||||:.:|||.||||
  Rat   327 SFSDFLRHYSRLEICNLTPDTLTCDSY----KKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQY 387

  Fly   450 IITLVDPDEEDEEGQ--CTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQ---GLN 509
            :|.|.:.||:||:|:  ||.:|.|:||:||.:|.||.:..||||.||.:.: ||..:..   ..|
  Rat   388 LIKLEEEDEDDEDGERGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPE-ELTGQTNIHLSKN 451

  Fly   510 FFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHV 574
            ||....:..||..|||.|||..|||||||.|::|||||:|::.|:|.||||||.:.:.:..||.:
  Rat   452 FFLTTRARERSDTFINLREVLNRFKLPPGEYVLVPSTFEPHKNGDFCIRVFSEKKADYQTVDDEI 516

  Fly   575 GYGGKADTITPGFPTPKPIDPQKE----GLRRLFDSIAGKDMEVDWMELKRILDH--SMRDDLPK 633
                :|:.        :.|:..:|    |.||||..:||:|.|:...||:.||..  :.|:|:  
  Rat   517 ----EANI--------EEIEANEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDI-- 567

  Fly   634 PVVFNRFSNNMAFETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGDNPAD 698
                                                                             
  Rat   568 ----------------------------------------------------------------- 567

  Fly   699 GGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGR 763
                       ::.|||.:.|:.||.|||.|.|||||.:||..|.::|.|::.|::..||:.:|.
  Rat   568 -----------KSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGT 621

  Fly   764 VSGFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKERDTEKNET 828
            ::.:::|:||..||:.|..::..|:..|:...:..|.||:|:.|.|:::....|||:.|.|...|
  Rat   622 MNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGT 686

  Fly   829 ATFTLEEWIERTI 841
            ....|..|:..::
  Rat   687 IQLDLISWLSFSV 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 162/306 (53%)
Calpain_III 418..565 CDD:279416 77/151 (51%)
EFh 719..765 CDD:238008 21/45 (47%)
Capn2NP_058812.1 Peptidase_C2 46..342 CDD:279042 162/306 (53%)
Domain III 345..514 83/173 (48%)
Calpain_III 356..507 CDD:279416 77/151 (51%)
Linker 515..529 2/25 (8%)
Domain IV 530..700 61/248 (25%)
EFh 577..631 CDD:238008 22/53 (42%)
FRQ1 604..>696 CDD:227455 28/91 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I3983
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 641 1.000 Inparanoid score I782
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.870

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