DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and clp-6

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_500081.2 Gene:clp-6 / 190738 WormBaseID:WBGene00000546 Length:627 Species:Caenorhabditis elegans


Alignment Length:567 Identity:234/567 - (41%)
Similarity:326/567 - (57%) Gaps:58/567 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AGQEFLNAAGE--AAMGAAKDVVGSVINEIFIKKEADTKRVLPSIKNMRVQPLQSQSNSTLYYGN 73
            ||....|..||  :.....|.|:.::::..|       ||...|...::.||        ||:  
 Worm    97 AGNAMFNLGGENNSLSSIGKVVLDNIVSGKF-------KRECHSYVPLKCQP--------LYF-- 144

  Fly    74 LGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENP 138
                      |.|.|       .||....|||||.|||:|.|:.:.:.|..||.||||.:|..||
 Worm   145 ----------YEERQ-------KCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANP 192

  Fly   139 QFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWV 203
            :..|.|.|||||:||.||:||.|||.|.|.|...||:||:|.:|||.|||||||||:||:||:||
 Worm   193 RLIVNGKSRFDVRQGSLGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWRYGEWV 257

  Fly   204 DVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWY 268
            ||:|||||||.||:|:||.|.:.:|.|..|||||||||:|:||.|.||:|.||:||||||::|:|
 Worm   258 DVVIDDRLPTVNGKLIYMSSQDGDECWGPLLEKAYAKLYGTYEHLDGGTTTEALEDFTGGLTEFY 322

  Fly   269 DLKEAPGN-LFTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQ 332
            ||...... :..::.|..:..|:..|||:|||...||:...||:||||||:|.|..::    ..:
 Worm   323 DLTSTDKTMILAMIMKGMQMGSLFACSIDPDPREKEAQLANGLVRGHAYSVTGVHTVE----TDK 383

  Fly   333 GKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVE 397
            .|:.::|:||||| :.||||.|||.|..|..:.:||:.::......||||||...||:..|..::
 Worm   384 EKVALLRIRNPWG-DTEWNGDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLD 447

  Fly   398 ICNLSPDSLTE-------DQQNSGKRKWEMSMYEGEW-TPGVTAGGCRNFLDTFWHNPQY--IIT 452
            .||||.|.:.|       :......::|.....:||| :...|||||.|..:||..||||  ...
 Worm   448 CCNLSADVMHEITEMTEIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQYETYFR 512

  Fly   453 LVDPDEEDEEGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGLNFFRYKSSV 517
            ...|...|   :||||.|:.||.||::.:.|::.|.||.::|.::.   .|........:..:.:
 Worm   513 ATSPSSND---KCTVIAAVFQKYRRNQLHRGLDMLQIGLSVYKMSG---PNEKVTAEMMKTHAPI 571

  Fly   518 GRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQ 564
            ..:..|::.||...||.:|||:|:|||.||:||.:.||::|.||..:
 Worm   572 ASTKLFVDYREAVVRFTVPPGYYVIVPCTFEPNHDAEFLLRTFSNVE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 153/296 (52%)
Calpain_III 418..565 CDD:279416 54/150 (36%)
EFh 719..765 CDD:238008
clp-6NP_500081.2 Peptidase_C2 158..450 CDD:366222 153/296 (52%)
Calpain_III 473..624 CDD:238132 54/152 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158977
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm4791
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.710

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