DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and clp-6

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_500081.2 Gene:clp-6 / 190738 WormBaseID:WBGene00000546 Length:627 Species:Caenorhabditis elegans


Alignment Length:567 Identity:234/567 - (41%)
Similarity:326/567 - (57%) Gaps:58/567 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AGQEFLNAAGE--AAMGAAKDVVGSVINEIFIKKEADTKRVLPSIKNMRVQPLQSQSNSTLYYGN 73
            ||....|..||  :.....|.|:.::::..|       ||...|...::.||        ||:  
 Worm    97 AGNAMFNLGGENNSLSSIGKVVLDNIVSGKF-------KRECHSYVPLKCQP--------LYF-- 144

  Fly    74 LGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENP 138
                      |.|.|       .||....|||||.|||:|.|:.:.:.|..||.||||.:|..||
 Worm   145 ----------YEERQ-------KCLDENRLFEDPQFPANNSSIYYKKPPKSHIVWLRPAKIFANP 192

  Fly   139 QFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWV 203
            :..|.|.|||||:||.||:||.|||.|.|.|...||:||:|.:|||.|||||||||:||:||:||
 Worm   193 RLIVNGKSRFDVRQGSLGNCWFLAAAATLAQRDELFYRVVPPDQSFTENYAGIFHFQFWRYGEWV 257

  Fly   204 DVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWY 268
            ||:|||||||.||:|:||.|.:.:|.|..|||||||||:|:||.|.||:|.||:||||||::|:|
 Worm   258 DVVIDDRLPTVNGKLIYMSSQDGDECWGPLLEKAYAKLYGTYEHLDGGTTTEALEDFTGGLTEFY 322

  Fly   269 DLKEAPGN-LFTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQ 332
            ||...... :..::.|..:..|:..|||:|||...||:...||:||||||:|.|..::    ..:
 Worm   323 DLTSTDKTMILAMIMKGMQMGSLFACSIDPDPREKEAQLANGLVRGHAYSVTGVHTVE----TDK 383

  Fly   333 GKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVE 397
            .|:.::|:||||| :.||||.|||.|..|..:.:||:.::......||||||...||:..|..::
 Worm   384 EKVALLRIRNPWG-DTEWNGDWSDKSSLWEQVDQEQREKMEFRIKEDGEFWMCLDDFMAQFANLD 447

  Fly   398 ICNLSPDSLTE-------DQQNSGKRKWEMSMYEGEW-TPGVTAGGCRNFLDTFWHNPQY--IIT 452
            .||||.|.:.|       :......::|.....:||| :...|||||.|..:||..||||  ...
 Worm   448 CCNLSADVMHEITEMTEIEVMEKQSKQWIQKSADGEWCSRKGTAGGCSNNENTFCTNPQYETYFR 512

  Fly   453 LVDPDEEDEEGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGLNFFRYKSSV 517
            ...|...|   :||||.|:.||.||::.:.|::.|.||.::|.::.   .|........:..:.:
 Worm   513 ATSPSSND---KCTVIAAVFQKYRRNQLHRGLDMLQIGLSVYKMSG---PNEKVTAEMMKTHAPI 571

  Fly   518 GRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQ 564
            ..:..|::.||...||.:|||:|:|||.||:||.:.||::|.||..:
 Worm   572 ASTKLFVDYREAVVRFTVPPGYYVIVPCTFEPNHDAEFLLRTFSNVE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 153/296 (52%)
Calpain_III 416..569 CDD:238132 54/152 (36%)
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
clp-6NP_500081.2 Peptidase_C2 158..450 CDD:459889 153/296 (52%)
Calpain_III 473..624 CDD:238132 54/152 (36%)
Blue background indicates that the domain is not in the aligned region.

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