DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and clp-1

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_498741.3 Gene:clp-1 / 176122 WormBaseID:WBGene00000542 Length:780 Species:Caenorhabditis elegans


Alignment Length:590 Identity:288/590 - (48%)
Similarity:386/590 - (65%) Gaps:56/590 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GAAKDVVGSVINEI---FIKKEADTKRVLPSIKNMRVQPLQSQSNSTLYYGNLGE---------- 76
            |...:|:|::|.|.   |:..:..|.|::.::....:..|..:.||   .||:|:          
 Worm   204 GGMVNVIGNLIGEAAHRFLGVDPGTGRIIGAVAGNVIMGLGGKDNS---LGNIGKVILDNIISGK 265

  Fly    77 ------------------------KSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQ 117
                                    ...|..|.:|.||:..:.:.||.|..|||||.|.|::.||.
 Worm   266 FRRDVDPFVRPGPDPDRGGGGSGPSPISPRPTTEPQDFYELRDQCLESKRLFEDPQFLANDSSLF 330

  Fly   118 FSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQ 182
            ||:||.:.:|||||.||...||...||:|||||.||||||||||||.||||.:..||:||:|.:|
 Worm   331 FSKRPPKRVEWLRPGEITREPQLITEGHSRFDVIQGELGDCWLLAAAANLTLKDELFYRVVPPDQ 395

  Fly   183 SFEENYAGIFHFRFWQYGKWVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEA 247
            ||.|||||||||:||||||||||:|||||||.||||:||||...|||||||||||||||.|||||
 Worm   396 SFTENYAGIFHFQFWQYGKWVDVVIDDRLPTSNGELLYMHSASNNEFWSALLEKAYAKLFGSYEA 460

  Fly   248 LKGGSTCEAMEDFTGGVSEWYDLKEAPGNLFTILQKAAERNSMMGCSIEPDPNVTEAETPQGLIR 312
            ||||:|.||:||.|||::|:.|||..|.||..::.:..|..|:.|||||.||||.||:...||::
 Worm   461 LKGGTTSEALEDMTGGLTEFIDLKNPPRNLMQMMMRGFEMGSLFGCSIEADPNVWEAKMSNGLVK 525

  Fly   313 GHAYSITKVCLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFD 377
            |||||||...::|  .||  |:..::|:|||||||.||||||||:|.|||.:|:..|.::||.||
 Worm   526 GHAYSITGCRIVD--GPN--GQTCILRIRNPWGNEQEWNGPWSDNSREWRSVPDSVKQDMGLKFD 586

  Fly   378 RDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRK----WEMSMYEGEWTPGVTAGGCRN 438
            .||||||||.||:.:|:::|||||.||.:.|..|.:|.:.    |..:.::|.|....|||||||
 Worm   587 HDGEFWMSFDDFMRNFEKMEICNLGPDVMDEVYQMTGVKAAGMVWAANTHDGAWVRNQTAGGCRN 651

  Fly   439 FLDTFWHNPQYIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELEN 503
            :::||.:|||:.:.|.|.|.:|::..||||.|::||.||:.:..|::.:.||||:|...:    |
 Worm   652 YINTFANNPQFRVQLTDSDPDDDDELCTVIFAVLQKYRRNLKQDGLDNVPIGFAVYDAGN----N 712

  Fly   504 RPQ-GLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNM 567
            |.: ...||....|..||..|||.||:..||::|||:|::|||||:||||.||::||::   |..
 Worm   713 RGRLSKQFFAANKSAMRSAAFINLREMTGRFRVPPGNYVVVPSTFEPNEEAEFMLRVYT---NGF 774

  Fly   568 EENDD 572
            .|:::
 Worm   775 IESEE 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 190/295 (64%)
Calpain_III 418..565 CDD:279416 65/147 (44%)
EFh 719..765 CDD:238008
clp-1NP_498741.3 Peptidase_C2 317..609 CDD:279042 190/295 (64%)
Calpain_III 631..772 CDD:279416 65/147 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158976
Domainoid 1 1.000 424 1.000 Domainoid score I312
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 578 1.000 Inparanoid score I553
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48339
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm4791
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2435
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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