DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and clp-4

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_497460.2 Gene:clp-4 / 175326 WormBaseID:WBGene00000545 Length:716 Species:Caenorhabditis elegans


Alignment Length:554 Identity:252/554 - (45%)
Similarity:329/554 - (59%) Gaps:33/554 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EAAMGAAKDVVGSVINEIFIKKEADTKRVLPSIKNMRVQPLQSQSNSTLYYGNLGEKSSSLGPYS 85
            |...||.|..|.:.       .:|....|.|.|....|.|.:.:.:...|    .:..|..|   
 Worm   174 ELDFGAPKPAVPAT-------PKAPVAPVAPVIPAPAVTPQKPKVDEPTY----ADSVSDFG--- 224

  Fly    86 EVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDV 150
              .|:||....||.:.:|||||.|||:..||.:...|...|.|.||.||..|||...:|.|||||
 Worm   225 --LDFETEREKCLRNKTLFEDPEFPATAASLYYRTPPRDRIIWKRPGEIIANPQLITQGESRFDV 287

  Fly   151 QQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDRLPTYN 215
            :||.|||||.|||.||:|....||:|::|..|||.|||||||||:||.|||||||::||||||.|
 Worm   288 KQGALGDCWFLAALANITLYDALFYRIVPPNQSFTENYAGIFHFQFWHYGKWVDVVVDDRLPTVN 352

  Fly   216 GELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDL-KEAPGNLFT 279
            .:|.|:||.:..||||||:|||||||||.||.|.||:|.||:||||||::|::|| |.....:..
 Worm   353 NQLYYLHSADNTEFWSALVEKAYAKLHGGYENLDGGTTAEALEDFTGGLTEYFDLRKSEKAAVLA 417

  Fly   280 ILQKAAERNSMMGCSIEPDPNVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQGKIPMIRMRNPW 344
            .|.|..|..|:.||||:.|.|:.||:...||:.|||||||.:..|.....:    ..::|:||||
 Worm   418 ALVKGMEMGSLFGCSIDADANIKEAQLRNGLVCGHAYSITAIHSITYYGED----TTLLRLRNPW 478

  Fly   345 GNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRVEICNLSPDSLTED 409
            |||.||||.|||.|.||..|.|..|.:|.:.|.|||||||||:||.::|.::|:|||:.:...|.
 Worm   479 GNEKEWNGAWSDGSSEWSKIDEATKKQIDVQFARDGEFWMSFEDFFSNFTQMEVCNLTAEIFDEI 543

  Fly   410 QQNSG----------KRKWEMSMYEGEWTPGV-TAGGCRNFLDTFWHNPQYIITLVDPDEEDE-E 462
            .:.:|          :.:|...|.:|||:... |||||.|...|:..|||:......|....| :
 Worm   544 AEMTGVNRATETVEEEHQWHEIMEDGEWSSKKGTAGGCNNNPSTYPKNPQFSTFFTAPQSSIEAD 608

  Fly   463 GQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGLNFFRYKSSVGRSPHFINTR 527
            |..|||||::||.||..|:.|.:.|.||.:||||........|....||.....:.|:..|:|||
 Worm   609 GNVTVIVAVLQKYRRELRSKGKDVLPIGVSIYSLGAEGTARSPLTAQFFSQNRPIARTTVFVNTR 673

  Fly   528 EVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFS 561
            ||..||::|||.|:|||.|||..::.||::||::
 Worm   674 EVTVRFRVPPGQYVIVPCTFDAYDDAEFLLRVYA 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 165/296 (56%)
Calpain_III 416..569 CDD:238132 62/148 (42%)
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
clp-4NP_497460.2 Peptidase_C2 241..534 CDD:459889 165/296 (56%)
Calpain_III 560..716 CDD:238132 62/148 (42%)
Blue background indicates that the domain is not in the aligned region.

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