DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and Capn5

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_063133414.1 Gene:Capn5 / 171495 RGDID:620084 Length:750 Species:Rattus norvegicus


Alignment Length:512 Identity:209/512 - (40%)
Similarity:307/512 - (59%) Gaps:51/512 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 EVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDV 150
            |.|:|..:..:||....|||||.|||:::||.:...|...:.|.||.:|.::|:.||:|.|..|:
  Rat   119 EDQNYSALKRACLRRKVLFEDPHFPATDDSLYYKGTPGPTVRWKRPKDICDDPRLFVDGISSHDL 183

  Fly   151 QQGELGDCWLLAATANLTQESNLFFRVIP--AEQSFE----ENYAGIFHFRFWQYGKWVDVIIDD 209
            .||::|:||.:||.::|....:|:.:|||  .||.:.    ::|||||||.||::|:||||::||
  Rat   184 HQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEWVDVVVDD 248

  Fly   210 RLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAP 274
            ||||.|.:|:|.||..|||||.||:|||||||.|.|:||.||:|.:|:.||||||||..||.|..
  Rat   249 RLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGD 313

  Fly   275 --------GNLFTILQKAAERNSMMGCSIEPDPNVTEAETPQ----GLIRGHAYSITKVCLI--- 324
                    ..||..:.|...|..::..||:.   :|.|:...    ||::||||::|.|..:   
  Rat   314 LATDEAKRSQLFERVLKVHSRGGLISASIKA---MTAADMETRLACGLVKGHAYAVTDVRKVRLG 375

  Fly   325 -DIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQD 388
             .::...:..|:.|||:||||| |.||.|||||:|.||:.:.:.::.::|:|...||||||:|:|
  Rat   376 HGLLAFFKSEKLDMIRLRNPWG-EREWTGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFED 439

  Fly   389 FLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWT----PGVT-AGGCRNFLDTFWHNPQ 448
            ...:|..:..|.|...|..     |..:.||.:...|.||    |... :|||.|..|||:.|||
  Rat   440 MCRYFTDIIKCRLINTSYL-----SIHKTWEEARLRGAWTRHEDPQQNRSGGCINHKDTFFQNPQ 499

  Fly   449 YIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMGM-ECLTIGFAIYSLNDRELENRPQGLNFFR 512
            ||..:..|::|       |::.:.|:.:||.|..|. |.|.|||.||.:.    |||...::..:
  Rat   500 YIFEVKKPEDE-------VLICIQQRPKRSTRREGKGENLAIGFDIYKVE----ENRQYRMHSLQ 553

  Fly   513 YKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEE 569
            :|::   |..:||:|.|..|.:||.|.|:|:|:||:|...|||::|||::..:|..|
  Rat   554 HKAA---SSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNCRE 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 139/317 (44%)
Calpain_III 416..569 CDD:238132 59/158 (37%)
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
Capn5XP_063133414.1 None
Blue background indicates that the domain is not in the aligned region.

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