DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn5

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_604456.2 Gene:Capn5 / 171495 RGDID:620084 Length:640 Species:Rattus norvegicus


Alignment Length:512 Identity:209/512 - (40%)
Similarity:307/512 - (59%) Gaps:51/512 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 EVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDV 150
            |.|:|..:..:||....|||||.|||:::||.:...|...:.|.||.:|.::|:.||:|.|..|:
  Rat     9 EDQNYSALKRACLRRKVLFEDPHFPATDDSLYYKGTPGPTVRWKRPKDICDDPRLFVDGISSHDL 73

  Fly   151 QQGELGDCWLLAATANLTQESNLFFRVIP--AEQSFE----ENYAGIFHFRFWQYGKWVDVIIDD 209
            .||::|:||.:||.::|....:|:.:|||  .||.:.    ::|||||||.||::|:||||::||
  Rat    74 HQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEWVDVVVDD 138

  Fly   210 RLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAP 274
            ||||.|.:|:|.||..|||||.||:|||||||.|.|:||.||:|.:|:.||||||||..||.|..
  Rat   139 RLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGD 203

  Fly   275 --------GNLFTILQKAAERNSMMGCSIEPDPNVTEAETPQ----GLIRGHAYSITKVCLI--- 324
                    ..||..:.|...|..::..||:.   :|.|:...    ||::||||::|.|..:   
  Rat   204 LATDEAKRSQLFERVLKVHSRGGLISASIKA---MTAADMETRLACGLVKGHAYAVTDVRKVRLG 265

  Fly   325 -DIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQD 388
             .::...:..|:.|||:||||| |.||.|||||:|.||:.:.:.::.::|:|...||||||:|:|
  Rat   266 HGLLAFFKSEKLDMIRLRNPWG-EREWTGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFED 329

  Fly   389 FLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWT----PGVT-AGGCRNFLDTFWHNPQ 448
            ...:|..:..|.|...|..     |..:.||.:...|.||    |... :|||.|..|||:.|||
  Rat   330 MCRYFTDIIKCRLINTSYL-----SIHKTWEEARLRGAWTRHEDPQQNRSGGCINHKDTFFQNPQ 389

  Fly   449 YIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMGM-ECLTIGFAIYSLNDRELENRPQGLNFFR 512
            ||..:..|::|       |::.:.|:.:||.|..|. |.|.|||.||.:.    |||...::..:
  Rat   390 YIFEVKKPEDE-------VLICIQQRPKRSTRREGKGENLAIGFDIYKVE----ENRQYRMHSLQ 443

  Fly   513 YKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEE 569
            :|::   |..:||:|.|..|.:||.|.|:|:|:||:|...|||::|||::..:|..|
  Rat   444 HKAA---SSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNCRE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 139/317 (44%)
Calpain_III 418..565 CDD:279416 58/152 (38%)
EFh 719..765 CDD:238008
Capn5NP_604456.2 Peptidase_C2 27..341 CDD:279042 139/317 (44%)
Domain III 344..496 61/170 (36%)
Calpain_III 354..493 CDD:279416 58/152 (38%)
C2_Calpain 515..638 CDD:176011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.