DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and Capn8

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_063128053.1 Gene:Capn8 / 170808 RGDID:620085 Length:753 Species:Rattus norvegicus


Alignment Length:801 Identity:332/801 - (41%)
Similarity:463/801 - (57%) Gaps:144/801 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LQSQSNSTLYYGNLGEKSSSLGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFS----RR 121
            |.|..|:..|.|               ||:||:...||.||.||:||.|||...:|.:.    ..
  Rat    68 LGSNQNAVKYLG---------------QDFETLRKQCLNSGVLFKDPEFPACPSALGYKDLGPGS 117

  Fly   122 PD-RHIEWLRPHEIAENPQFFVEGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFE 185
            || :.|.|.||.|:..||||.|.|.:|.|::||.|||||||||.|:||....|.:||:|.:|||:
  Rat   118 PDTQGIVWKRPTELCPNPQFIVGGATRTDIRQGGLGDCWLLAAIASLTLNEKLLYRVLPRDQSFQ 182

  Fly   186 ENYAGIFHFRFWQYGKWVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKG 250
            ::|||||||:|||||:||:|:|||||||.||:|:::||.|.|||||||||||||||:||||||.|
  Rat   183 KDYAGIFHFQFWQYGEWVEVVIDDRLPTKNGQLLFLHSEEGNEFWSALLEKAYAKLNGSYEALVG 247

  Fly   251 GSTCEAMEDFTGGVSEWYDLKEAPGNLFTILQKAAERNSMMGCSIEPDPNV-TEAETPQGLIRGH 314
            |||.|..||||||:||:||||:.|.||:.|:|||..:.|::||||:..... .||.|.|.|::||
  Rat   248 GSTIEGFEDFTGGISEFYDLKKPPENLYYIIQKALRKGSLLGCSIDVSTAAEAEATTRQKLVKGH 312

  Fly   315 AYSITKVCLIDIVTPNRQGKIP--MIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFD 377
            |||:|.|..:     |..|: |  :||:||||| |.||:|.|||::|||.||...:|.|:....:
  Rat   313 AYSVTGVEEV-----NFHGR-PEKLIRLRNPWG-EVEWSGAWSDNAPEWNYIDPRRKEELDKKAE 370

  Fly   378 RDGEFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDT 442
             ||||||||.|||..:.|:||||||||||:.::.:    ||.:.::.|.||.|.|||||.|:..|
  Rat   371 -DGEFWMSFSDFLKQYSRLEICNLSPDSLSSEEIH----KWNLVLFNGRWTRGSTAGGCLNYPGT 430

  Fly   443 FWHNPQYIITLVDPDEEDEEGQ----CTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELEN 503
            :|.|||:.|.|.:.||:.|||.    |||::.|||||||.::.:|...|:||:|:|.: .:|||:
  Rat   431 YWTNPQFKIHLDEVDEDQEEGTSEPCCTVLLGLMQKNRRRQKRIGQGMLSIGYAVYQI-PKELES 494

  Fly   504 RPQ---GLNFFRYKSSVGRSPH-----FINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVF 560
            ...   |.:||     :||.|.     ::|.|||.:|.:||||.||:|||||:|.::|:|.:|||
  Rat   495 HTDAHLGRDFF-----LGRQPSTCSSTYMNLREVSSRVRLPPGQYLVVPSTFEPFKDGDFCLRVF 554

  Fly   561 SETQNNMEENDDHVGYGGKADTIT--PGFPTPKPIDPQKEGLRRLFDSIAGKDMEVDWMELKRIL 623
            ||.:....|    :|     ||::  |..|.|:.:|.:.|.:|.||:...|||.|:...:|||:|
  Rat   555 SEKKAKALE----IG-----DTVSGHPHEPHPRDMDEEDEHVRSLFEEFVGKDSEISANQLKRVL 610

  Fly   624 DH--SMRDDLPKPVVFNRFSNNMAFETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQ 686
            :.  |.|.|             |.|:                                       
  Rat   611 NEVLSKRTD-------------MKFD--------------------------------------- 623

  Fly   687 SNKRLIGDNPADGGPVTANAIVDETHGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKA 751
                                      ||:.:.||.|:::||:|.:|.||..||:||..:|..:..
  Rat   624 --------------------------GFNINTCREMISLLDSDGTGSLGPMEFKTLWLKIRTYLE 662

  Fly   752 IFKVYDVENTGRVSGFQLREALNSAGYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYID 816
            ||:..|..:.|.:...::|.||..||:.|||:|...:..||......:.|:.|:.|.::::|...
  Rat   663 IFQEMDHNHVGTIEAHEMRTALKKAGFTLNNQVQQTIAMRYACSKLGVDFNGFVACMIRLETLFK 727

  Fly   817 IFKERDTEKNETATFTLEEWI 837
            :|:..|.::|.....:|.||:
  Rat   728 LFRLLDKDQNGIVQLSLAEWL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889 171/303 (56%)
Calpain_III 416..569 CDD:238132 73/164 (45%)
EFh_PEF_CalpA_B 600..843 CDD:320071 57/240 (24%)
EF-hand motif 600..627 CDD:320071 11/28 (39%)
EF-hand motif 717..747 CDD:320071 13/29 (45%)
EF-hand motif 748..778 CDD:320071 8/29 (28%)
EF-hand motif 784..812 CDD:320071 6/27 (22%)
EF-hand motif 813..843 CDD:320071 7/25 (28%)
Capn8XP_063128053.1 None

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