DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and Capn6

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_031629.3 Gene:Capn6 / 12338 MGIID:1100850 Length:641 Species:Mus musculus


Alignment Length:520 Identity:187/520 - (35%)
Similarity:280/520 - (53%) Gaps:55/520 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 LGPYSEV---QDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFV 142
            :||..::   |.|:.:...|:..|.||.||.|...|:||.|:|.....:.|.||.:|:::|...|
Mouse     1 MGPPLKLFKNQKYQELKQECMKDGRLFCDPTFLPENDSLFFNRLLPGKVVWKRPQDISDDPHLIV 65

  Fly   143 EGYSRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFE------ENYAGIFHFRFWQYGK 201
            ...|...:.||.||:..:::|.:.|..:.:.:.:.||..:..|      |.||||||||||.:|:
Mouse    66 GNISNHQLIQGRLGNKAMISAFSCLAVQESHWTKAIPNHKDQEWDPRKPEKYAGIFHFRFWHFGE 130

  Fly   202 WVDVIIDDRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSE 266
            |.:|:|||.|||.||:|::..||..||||:||||||||||.|.||||.|.:..:.:.||||.::|
Mouse   131 WTEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGLTITDIIMDFTGTLAE 195

  Fly   267 --------WYDLKEAPGNLFTILQKAAERNSMMGCSIE-PDPNVTEAETPQGLIRGHAYSITKV- 321
                    :.||.|....||..|.|...:..::.|||| |.....|.||..||::|:.|::|.: 
Mouse   196 IIDMQKGRYTDLVEEKYKLFGELYKTFTKGGLICCSIESPSQEEQEVETDWGLLKGYTYTMTDIR 260

  Fly   322 ------CLIDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDG 380
                  .|:::.:..   |:.|:|:|||.|.: ||:||||:.|.||:.:....:..:||....||
Mouse   261 KLRLGERLVEVFSTE---KLYMVRLRNPLGRQ-EWSGPWSEISEEWQQLTVTDRKNLGLVMSDDG 321

  Fly   381 EFWMSFQDFLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWT----PGVT-AGGCRNFL 440
            |||||.:||.::|.::.:|        .:..|....:.|:....|.||    |.:. :|||.|..
Mouse   322 EFWMSLEDFCHNFHKLNVC--------RNVNNPVFGRKELESVVGCWTVDDDPLMNRSGGCYNNR 378

  Fly   441 DTFWHNPQYIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMGM-ECLTIGFAIYSLNDRELENR 504
            |||..|||||.|:      .|:|. .||::|.||:.|:.|.||. :...|||.::.:.    .||
Mouse   379 DTFLQNPQYIFTV------PEDGH-KVIMSLQQKDLRTYRRMGRPDNYIIGFELFKVE----MNR 432

  Fly   505 PQGLNFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEE 569
            ...|:....:...|.|. :|:||.|.....|..|.|::||:.|......||::|:|||....:.|
Mouse   433 RFRLHHLYIQERAGTST-YIDTRTVFLSKYLKKGSYVLVPTMFQHGRTSEFLLRIFSEVPVQLRE 496

  Fly   570  569
            Mouse   497  496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 124/317 (39%)
Calpain_III 418..565 CDD:279416 53/152 (35%)
EFh 719..765 CDD:238008
Capn6NP_031629.3 CysPc 13..351 CDD:128526 130/349 (37%)
Domain III 344..495 54/162 (33%)
Calpain_III 349..497 CDD:238132 54/160 (34%)
C2_Calpain 514..639 CDD:176011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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