DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and Capn5

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_006507338.1 Gene:Capn5 / 12337 MGIID:1100859 Length:653 Species:Mus musculus


Alignment Length:512 Identity:212/512 - (41%)
Similarity:309/512 - (60%) Gaps:51/512 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 EVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGYSRFDV 150
            |.|:|..:..:||....|||||||||:::||.:...|...:.|.||.:|.::|:.||:|.|..|:
Mouse    22 EDQNYSALKRACLRKKVLFEDPLFPATDDSLYYKGTPGPTVRWKRPKDICDDPRLFVDGISSHDL 86

  Fly   151 QQGELGDCWLLAATANLTQESNLFFRVIP--AEQSFE----ENYAGIFHFRFWQYGKWVDVIIDD 209
            .||::|:||.:||.::|....:|:.:|||  .||.:.    ::|||||||.||::|:|||||:||
Mouse    87 HQGQVGNCWFVAACSSLASRESLWQKVIPDWKEQEWNPEKPDSYAGIFHFNFWRFGEWVDVIVDD 151

  Fly   210 RLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAP 274
            ||||.|.:|:|.||..|||||.||:|||||||.|.|:||.||:|.:|:.||||||||..||.|..
Mouse   152 RLPTVNNQLIYCHSNSKNEFWCALVEKAYAKLAGCYQALDGGNTADALVDFTGGVSEPIDLTEGD 216

  Fly   275 --------GNLFTILQKAAERNSMMGCSIEPDPNVT----EAETPQGLIRGHAYSITKVCLI--- 324
                    ..||..:.|...|..::..||:.   ||    ||....||::||||::|.|..:   
Mouse   217 LATDEAKRNQLFERVLKVHSRGGLISASIKA---VTAADMEARLACGLVKGHAYAVTDVRKVRLG 278

  Fly   325 -DIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQD 388
             .::...:..|:.|||:||||| |.||.|||||:|.||:.:.:.::.::|:|...||||||:|:|
Mouse   279 HGLLAFFKSEKLDMIRLRNPWG-EREWTGPWSDTSEEWQKVSKSEREKMGVTVQDDGEFWMTFED 342

  Fly   389 FLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWT----PGVT-AGGCRNFLDTFWHNPQ 448
            ...:|..:..|.|...|..     |..:.||.:...|.||    |... :|||.|..|||:.|||
Mouse   343 MCRYFTDIIKCRLINTSYL-----SIHKTWEEARLHGAWTRHEDPQQNRSGGCINHKDTFFQNPQ 402

  Fly   449 YIITLVDPDEEDEEGQCTVIVALMQKNRRSKRNMGM-ECLTIGFAIYSLNDRELENRPQGLNFFR 512
            |:..:..|::|       |::::.|:.:||.|..|. |.|.|||.||.:.    |||...::..:
Mouse   403 YVFEVKKPEDE-------VLISIQQRPKRSTRREGKGENLAIGFDIYKVE----ENRQYRMHSLQ 456

  Fly   513 YKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEE 569
            :|::   |..:||:|.|..|.:||.|.|:|:|:||:|...|||::|||::..:|..|
Mouse   457 HKAA---SSIYINSRSVFLRTELPEGRYVIIPTTFEPGHTGEFLLRVFTDVPSNCRE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 143/317 (45%)
Calpain_III 418..565 CDD:279416 57/152 (38%)
EFh 719..765 CDD:238008
Capn5XP_006507338.1 Peptidase_C2 40..354 CDD:366222 143/317 (45%)
Calpain_III 365..511 CDD:238132 59/160 (37%)
C2_Calpain 528..651 CDD:176011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4459
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.770

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