DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and capn15

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_005174254.1 Gene:capn15 / 100330198 ZFINID:ZDB-GENE-140106-70 Length:1153 Species:Danio rerio


Alignment Length:538 Identity:145/538 - (26%)
Similarity:216/538 - (40%) Gaps:127/538 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 YETILNSCLASGSLFEDPLFPASNESLQFSRR---PDRHIEWLRPHEIAENPQFFVEG--YSRF- 148
            :|.|::.|..:...|.|..||....|:.|...   ..|..:|||||||..| .|...|  :|.| 
Zfish   543 WENIVSFCRENAVNFVDDSFPPGPRSVGFPENDSVQQRIKKWLRPHEINCN-NFKDRGVKWSVFR 606

  Fly   149 -----DVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIID 208
                 |:.||.||:||.|:|.|.|.:...|..||:......:|   |.:..|..:.|.|..|::|
Zfish   607 TPRPSDILQGLLGNCWFLSALAVLAERPELVERVMITRSICQE---GAYQVRLCKDGMWTTVLVD 668

  Fly   209 DRLPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEA 273
            |.||......:.....::.:.|.||:|||.|||||||.||:.|...|.:...||...|...|:.:
Zfish   669 DMLPCDEYGFLLFSQAQRRQLWVALIEKALAKLHGSYFALQAGRAIEGLATLTGAPCESLMLQVS 733

  Fly   274 PGN----------LFTILQKAAERNSMMGCS-----IEPDPNVTEAETPQGLIRGHAYSITKVCL 323
            ..|          ::..:..:.|...:||.|     ::.|..|.|:   .||...|||||..|  
Zfish   734 STNPREEPIDTDLIWAKMLSSKEAGFLMGASCGGGNMKVDDAVYES---LGLRPRHAYSILDV-- 793

  Fly   324 IDIVTPNRQGKIPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQD 388
            .|:     || ..::|:||||| ...|||.|||   ||...|:..:.|:......:|.|||.:.|
Zfish   794 RDV-----QG-YRLLRLRNPWG-RFSWNGSWSD---EWSDWPQHLRHELMAHGSSEGVFWMEYGD 848

  Fly   389 FLNHFDRVEICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITL 453
            |:.:||.|:||.:.||             |:....:|.:.       ||.      ..|..:..|
Zfish   849 FIKYFDSVDICKIHPD-------------WQEVRLQGCFP-------CRA------SKPVTVTAL 887

  Fly   454 VDPDEEDEEGQCTVI------VALMQKNRRSKRNMGME----CLTIGFAIYSLNDRELENRPQGL 508
                        ||:      .||.|:..|........    |:.:..|.:|..::.:..|....
Zfish   888 ------------TVLERTALEFALFQEGSRRSDTADSHLLDLCIMVFRASFSNGNKLVLGRLLAH 940

  Fly   509 NFFRYKSSVGRSPHFINTREVCARFKLPPGHYLIVPSTFD---------------------PNEE 552
            :....|..||            ....|.||.|.:|...|:                     |:::
Zfish   941 SKRAVKKFVG------------CDVMLEPGEYAVVCCAFNHWQMDLSGASTPVSSPTNARRPSQD 993

  Fly   553 -GEFIIRVFSETQNNMEE 569
             ..:|:.::|..|..:|:
Zfish   994 FPGYILAIYSSRQVMVEQ 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 109/321 (34%)
Calpain_III 418..565 CDD:279416 28/178 (16%)
EFh 719..765 CDD:238008
capn15XP_005174254.1 ZnF_RBZ 78..102 CDD:197784
RanBP2-type Zn finger 80..99 CDD:275375
RanBP2-type Zn finger 122..141 CDD:275375
ZnF_RBZ 196..220 CDD:197784
RanBP2-type Zn finger 198..217 CDD:275375
RanBP2-type Zn finger 274..293 CDD:275375
RanBP2-type Zn finger 359..381 CDD:275375
RanBP2-type Zn finger 415..434 CDD:275376
ZnF_RBZ 484..507 CDD:197784
RanBP2-type Zn finger 485..504 CDD:275376
CysPc 545..860 CDD:238004 111/333 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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