DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and capn3b

DIOPT Version :9

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001230250.1 Gene:capn3b / 100034405 ZFINID:ZDB-GENE-041001-149 Length:723 Species:Danio rerio


Alignment Length:847 Identity:312/847 - (36%)
Similarity:463/847 - (54%) Gaps:156/847 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LNAAGEAAMGAAKDVVGSVINEIFIKKEADTKRVLPSIKNMRVQPLQSQSNSTLYYGNLGEKSSS 80
            |..|....:|:.....|::.:.|..:.||        :|:.|                       
Zfish    14 LTEAAPQTVGSGFTAPGNIYSAILSRNEA--------VKDAR----------------------- 47

  Fly    81 LGPYSEVQDYETILNSCLASGSLFEDPLFPASNESLQFSRRPDRHIEWLRPHEIAENPQFFVEGY 145
                 .::|::.:.:..:....|||||||||.:.||.:|.:....:||.||.||.:||||.:.|.
Zfish    48 -----RLKDFQELRDKYVRKKVLFEDPLFPAQDSSLFYSEKFPLKLEWKRPMEICKNPQFILGGA 107

  Fly   146 SRFDVQQGELGDCWLLAATANLTQESNLFFRVIPAEQSFEENYAGIFHFRFWQYGKWVDVIIDDR 210
            :|.|:.||:|||||||||.|.||....:..||:|.:|||.|||||||||:||:||:||||:||||
Zfish   108 NRTDICQGDLGDCWLLAAIACLTLNDVILKRVVPHDQSFTENYAGIFHFQFWRYGEWVDVVIDDR 172

  Fly   211 LPTYNGELMYMHSTEKNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVSEWYDLKEAPG 275
            ||||..:|::..|.:.|||||||:|||||||||||||||||::.||||||||||:|:|::.|||.
Zfish   173 LPTYKNKLVFTRSGQNNEFWSALMEKAYAKLHGSYEALKGGNSLEAMEDFTGGVTEFYEITEAPK 237

  Fly   276 NLFTILQKAAERNSMMGCSIEP-DPNVTEAETPQGLIRGHAYSITKVCLIDIVTPNRQGK----- 334
            .|:.|::||.:|.|:|||:|:. .|.....:|..||:||||||:|.|         .|||     
Zfish   238 ELYNIMRKALKRGSLMGCAIDTLVPTAQRTKTASGLVRGHAYSVTGV---------EQGKRKDGK 293

  Fly   335 ---IPMIRMRNPWGNEAEWNGPWSDSSPEWRYIPEEQKAEIGLTFDRDGEFWMSFQDFLNHFDRV 396
               |.::|:|:|||...    |.:..|.:|..:.:.::.:..|.....|||||.|::|..:|.::
Zfish   294 DLMIRLVRVRDPWGVAP----PPACKSNDWVELAKTEQDKQRLQPGEQGEFWMCFEEFQKNFTKL 354

  Fly   397 EICNLSPDSLTEDQQNSGKRKWEMSMYEGEWTPGVTAGGCRNFLDTFWHNPQYIITLVDPDEEDE 461
            |||||:||:|.:||.    .||.::::||.|..|.:|||||||.||:|.|||:.:.|::.|.  :
Zfish   355 EICNLTPDTLEDDQM----FKWNVTVHEGRWVKGCSAGGCRNFPDTYWTNPQFRLVLLEADA--K 413

  Fly   462 EGQCTVIVALMQKNRRSKRNMGMECLTIGFAIYSLNDRELENRPQGL--NFFRYKSSVGRSPHFI 524
            |..|||:||||||.||.:|..|.....||||||.:......|:.|.|  :||.|.:|..||..::
Zfish   414 EKTCTVVVALMQKGRRVERCSGATLHNIGFAIYEVPKEMKGNQQQQLSKDFFLYNASTARSKSYV 478

  Fly   525 NTREVCARFKLPPGHYLIVPSTFDPNEEGEFIIRVFSETQNNMEENDDHV-GYGGKADTITPGFP 588
            |.|||..||.|.||.|:|:||||||::|.||::|||||.::..:..|..: ....:.|.:     
Zfish   479 NIREVTERFCLKPGEYVIIPSTFDPHKESEFLLRVFSENRSTSKVIDAEIEAEPMQVDNV----- 538

  Fly   589 TPKPIDP-------QKEGLRRLFDSIAGKDMEVDWMELKRILDHSMRDDLPKPVVFNRFSNNMAF 646
             .|.|.|       :::..|.:|..|||.|||::..||:.:|:..:                   
Zfish   539 -KKKIKPFEEEETEEEKQFRAIFQQIAGDDMEINANELRTVLNRVV------------------- 583

  Fly   647 ETQAAGPGDDGAGACGLLSLICGPFLKGTPFEEQLGMNDQSNKRLIGDNPADGGPVTANAIVDET 711
                                                   ..:|.|                  :|
Zfish   584 ---------------------------------------AKHKEL------------------KT 591

  Fly   712 HGFSKDVCRSMVAMLDADKSGKLGFEEFETLLSEIAKWKAIFKVYDVENTGRVSGFQLREALNSA 776
            .|||.:.||||:|:||.|.:|.|..:||:.|.::|.:||.:|..:|.:.:..:|.|::|.||..|
Zfish   592 EGFSLESCRSMIALLDTDGTGHLNLQEFKHLWNKIKQWKLVFTRFDTDKSSTISSFEMRNALTEA 656

  Fly   777 GYHLNNRVLNVLGHRYGSRDGKIAFDDFIMCAVKIKTYIDIFKERDTEKNETATFTLEEWIERTI 841
            |:.|||::.:::..||.:...::.||.:|.|.|:::.....|:..|.:.:......:.||::.|:
Zfish   657 GFQLNNQLYDIICMRYANEHMELDFDSYISCLVRLEGMFRAFRAFDKDGDGLIKLNVFEWLQLTM 721

  Fly   842 YS 843
            |:
Zfish   722 YA 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:279042 155/304 (51%)
Calpain_III 418..565 CDD:279416 74/148 (50%)
EFh 719..765 CDD:238008 18/45 (40%)
capn3bNP_001230250.1 Peptidase_C2 66..358 CDD:279042 155/304 (51%)
Calpain_III 372..519 CDD:279416 74/148 (50%)
EFh 555..623 CDD:298682 29/143 (20%)
EFh 599..654 CDD:238008 22/54 (41%)
EFh 630..719 CDD:298682 24/88 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 358 1.000 Domainoid score I921
eggNOG 1 0.900 - - E1_KOG0045
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 656 1.000 Inparanoid score I755
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704215at2759
OrthoFinder 1 1.000 - - FOG0000071
OrthoInspector 1 1.000 - - mtm6388
orthoMCL 1 0.900 - - OOG6_100404
Panther 1 1.100 - - O PTHR10183
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X74
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.870

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