DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cer and RD21A

DIOPT Version :9

Sequence 1:NP_611420.1 Gene:cer / 37229 FlyBaseID:FBgn0034443 Length:79 Species:Drosophila melanogaster
Sequence 2:NP_564497.1 Gene:RD21A / 841122 AraportID:AT1G47128 Length:462 Species:Arabidopsis thaliana


Alignment Length:66 Identity:18/66 - (27%)
Similarity:36/66 - (54%) Gaps:6/66 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EEW-VEYKSKFDKNYEAEEDLMRRRIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQ 70
            |.| |::.....:|...|:| .|..|:.::...::|||.|    .:::::|:...||||.:|:..
plant    51 EAWLVKHGKAQSQNSLVEKD-RRFEIFKDNLRFVDEHNEK----NLSYRLGLTRFADLTNDEYRS 110

  Fly    71 R 71
            :
plant   111 K 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cerNP_611420.1 Inhibitor_I29 9..68 CDD:400519 16/59 (27%)
RD21ANP_564497.1 Inhibitor_I29 50..107 CDD:214853 17/60 (28%)
Peptidase_C1 137..352 CDD:395062
GRAN 376..432 CDD:197621
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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