DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10081 and tfr1b

DIOPT Version :10

Sequence 1:NP_611418.1 Gene:CG10081 / 37226 FlyBaseID:FBgn0034441 Length:875 Species:Drosophila melanogaster
Sequence 2:NP_001009918.2 Gene:tfr1b / 494478 ZFINID:ZDB-GENE-041220-2 Length:771 Species:Danio rerio


Alignment Length:182 Identity:37/182 - (20%)
Similarity:72/182 - (39%) Gaps:44/182 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 FIAERAQANLYDFEAIGTKVVGSDENEHKTVQFLLK------------ELNLIKDNIQEDLFDME 127
            ||:.|...   |::..||::...:..:..|.|.:::            .|.|:.|.|      :.
Zfish   558 FISSRTTP---DYKYFGTEMDTKERLDSVTGQQVVELSMLAAQVAGQMALRLVHDQI------LR 613

  Fly   128 IDLQYAYGAYVKWNLVNMYQGIQNVV--VKLTPKGTTSENYILVNSHFDSQPTSPSTGDDGHMVV 190
            :|:. .||..::.::.|:...: ||:  .|:....|.|..:::......|:..:....|..:..:
Zfish   614 LDVT-KYGGVIESHVKNIIHHV-NVLKSEKVEKIETLSTEWLIAAKSSCSRAATKLNNDIKNSDL 676

  Fly   191 SILEVLRVISSRRKSFEHPI--------------IFLINGSE-----ENSLQ 223
            ..:|:.|:|::|....||..              ||..||.:     ||.||
Zfish   677 EDMEMCRIINNRIMKVEHNFLSPYVSIRDFPFRHIFFGNGWQTATDLENYLQ 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10081NP_611418.1 M28_Fxna_like 72..379 CDD:349872 37/182 (20%)
tfr1bNP_001009918.2 PA_TfR 209..383 CDD:239043
M28_TfR 375..615 CDD:349946 12/65 (18%)
TFR_dimer 648..760 CDD:461238 17/81 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.