DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10073 and Tfr2

DIOPT Version :10

Sequence 1:NP_001261090.1 Gene:CG10073 / 37225 FlyBaseID:FBgn0034440 Length:881 Species:Drosophila melanogaster
Sequence 2:NP_056614.3 Gene:Tfr2 / 50765 MGIID:1354956 Length:798 Species:Mus musculus


Alignment Length:270 Identity:54/270 - (20%)
Similarity:93/270 - (34%) Gaps:91/270 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 LLVNSHFDSKPTS--------------------------PSAGDAGQMVVAILEVLRV---MCST 210
            |:||:|..|.|.|                          |.|..:......:||::|.   |.|.
Mouse   394 LVVNNHRVSTPISNIFACIEGFAEPDHYVVIGAQRDAWGPGAAKSAVGTAILLELVRTFSSMVSN 458

  Fly   211 KQAIRHPVVFL-LNGAEENPLQASHGFITQHKWAKNCKVVLNLDAA----------GNGGSDIVF 264
            ....|..::|: .:|.:       .|.:...:|.:....||:|.|.          |:|  ....
Mouse   459 GFRPRRSLLFISWDGGD-------FGSVGATEWLEGYLSVLHLKAVVYVSLDNSVLGDG--KFHA 514

  Fly   265 QTGPNSPWLVEKY--KENAPHYLATTMAEEIFQT---------GILPSDTDFAIFVKYGNLIGLD 318
            :|.|....|:|..  :.::|::...|:.|::..|         ..||.|:....|..:..:..::
Mouse   515 KTSPLLVSLIENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDSSAYSFTAFAGVPAVE 579

  Fly   319 MAKFINGFAY---HTKYDQFSNIP---RGS----------------IQNTGDNLLGL-------- 353
            .:...:...|   |||.|.:.|:.   ||.                |:.:.|:||.|        
Mouse   580 FSFMEDDRVYPFLHTKEDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLSHDHLLPLDFGRYGDV 644

  Fly   354 -VRSIANSTE 362
             :|.|.|..|
Mouse   645 VLRHIGNLNE 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10073NP_001261090.1 M28_Fxna_like 80..387 CDD:349872 54/270 (20%)
Tfr2NP_056614.3 Endocytosis signal. /evidence=ECO:0000255 23..26
PA_TfR 206..396 CDD:239043 1/1 (100%)
M28_TfR 404..637 CDD:349946 44/241 (18%)
TFR_dimer 664..788 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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