DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10062 and Folh1

DIOPT Version :10

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_476533.2 Gene:Folh1 / 85309 RGDID:70963 Length:752 Species:Rattus norvegicus


Alignment Length:392 Identity:76/392 - (19%)
Similarity:132/392 - (33%) Gaps:92/392 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 MHWEMVNMYQGIQNVVVKLSEKNSTN-ENYLLINSHYDS-VPGSPGAGDDGSMVVTMLEVMRVIA 186
            :|....|....|.||:..|  |.:.. :.|:::..|.|: |.|........::|..::.....:.
  Rat   346 LHIHSYNKVTRIYNVIGTL--KGAVEPDRYVILGGHRDAWVFGGIDPQSGAAVVHEIVRTFGTLK 408

  Fly   187 KSGDPLAHPIVFLFNGAEENPLQASHAFITQHK--WAKNCKALINLDSAGSGGREILFQSGP-NH 248
            |.|......|:|....|||..|..|..:..:|.  ..:...|.||.||:..|...:.....| .|
  Rat   409 KKGWRPRRTILFASWDAEEFGLLGSTEWAEEHSRLLQERGVAYINADSSIEGNYTLRVDCTPLMH 473

  Fly   249 PWLMNYYRNVPHPFANTLAEELFQA----------------GYIPSDTDFRIFRDYGGVPGLDMA 297
            ..:.|..:.:|.|......:.|:.:                ..:.|..||.:|....|:......
  Rat   474 SLVYNLTKELPSPDEGFEGKSLYDSWKEKSPSTEFIGMPRISKLGSGNDFEVFFQRLGIASGRAR 538

  Fly   298 YIFNGYVYHTKYNRINAFPRASFQHTGDNVLSLARALANAPELDDTAAHSEGHNIFYDFLGWFMI 362
            |..|     .|.|:::::|             |..::....||.:.         |||....:.:
  Rat   539 YTKN-----WKTNKVSSYP-------------LYHSVYETYELVEK---------FYDPTFKYHL 576

  Fly   363 FYTETTSIIV----NVVVT-------LLALLGVGISIYFMSLRSGCSWKGVLLRFSISIAIQFVS 416
            ...:....:|    |.:|.       .:||.....:||.:|:......|..::.|          
  Rat   577 TVAQVRGAMVFELANSIVLPFDCQSYAVALKKHAETIYNISMNHPQEMKAYMISF---------- 631

  Fly   417 LILAIGLALLVALFMDGVDRSMSWFTSSWTIFGLYLA------PIVFGLSILPALYLEKTKRDPL 475
                           |.:..:::.||...:.|...|.      ||:..:.....:|||:...|||
  Rat   632 ---------------DSLFSAVNNFTDVASKFNQRLQDLDKSNPILLRILNDQLMYLERAFIDPL 681

  Fly   476 GL 477
            ||
  Rat   682 GL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:349872 51/260 (20%)
Folh1NP_476533.2 Zinc_peptidase_like 60..>117 CDD:472712
PA_GCPII_like 122..348 CDD:239036 0/1 (0%)
NAALADase 276..589 52/271 (19%)
M28_PSMA_like <356..597 CDD:349942 52/269 (19%)
TFR_dimer 629..749 CDD:461238 16/80 (20%)
Blue background indicates that the domain is not in the aligned region.

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