DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10062 and Tfrc

DIOPT Version :10

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_073203.1 Gene:Tfrc / 64678 RGDID:70488 Length:761 Species:Rattus norvegicus


Alignment Length:349 Identity:63/349 - (18%)
Similarity:101/349 - (28%) Gaps:149/349 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 VTNAGFPYKEKTSPQRYS------LIHAHR-----RLHNADGSTRIDESGLYIYPQDRRFGIAKD 676
            :.:|.|..|:......||      ::.|.:     ::.||.....|   |:.||.....|.:.:.
  Rat   233 LVHANFGTKKDFEELNYSVNGSLVIVRAGKITFAEKVANAQSFNAI---GVLIYMDRNTFPVVEA 294

  Fly   677 NIAAIGEAHQVSDFCDEEMFCGMPLYNHRWNKARQYSMWIETSESPEIPTEY------------- 728
            ::...|.||..:   .:....|.|.:||......|      :|..|.||.:.             
  Rat   295 DLQFFGHAHLGT---GDPYTPGFPSFNHTQFPPSQ------SSGLPSIPVQTISRAAAEKLFKNM 350

  Fly   729 -----PMLVLQDSSELETSAQRRFNFTLAGPSHMGIFINVKNDARILN----------------- 771
                 |...:..|.:||.|..:....|:.         ||..:.||||                 
  Rat   351 EGNCPPSWNIDSSCKLELSQNQNVKLTVN---------NVLKETRILNIFGVIKGYEEPDRYIVV 406

  Fly   772 ------WS-------------------FNDTLIREQAEPPYMVYFS------YG----------- 794
                  |.                   |:|.:.::...|...:.|:      ||           
  Rat   407 GAQRDAWGPGVAKSSVGTGLLLKLAQVFSDMISKDGFRPSRSIIFASWTAGDYGAVGATEWLEGY 471

  Fly   795 -------------LDD------------SPLEFTIDVELNDYLQKTTSTFDTPTLEIGIGGHWVT 834
                         ||.            |||.:|:   :...:|......|         |.::.
  Rat   472 LSSLHLKAFTYINLDKVVLGTSNFKVSASPLLYTL---MGKIMQDVKHPID---------GKYLY 524

  Fly   835 QD---ITAIEKLSSYINRFPSYAY 855
            :|   |:.||:||.....||..||
  Rat   525 RDSNWISKIEELSLDNAAFPFLAY 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:349872
TfrcNP_073203.1 Mediates interaction with SH3BP4. /evidence=ECO:0000250|UniProtKB:P02786 1..67
Endocytosis signal. /evidence=ECO:0000250|UniProtKB:P02786 20..23
Stop-transfer sequence. /evidence=ECO:0000250|UniProtKB:P02786 58..61
PA_TfR 201..378 CDD:239043 30/156 (19%)
M28_TfR 386..611 CDD:349946 30/175 (17%)
Ligand-binding. /evidence=ECO:0000250 570..761
TFR_dimer 638..751 CDD:461238
Cell attachment site, required for binding to transferrin. /evidence=ECO:0000250|UniProtKB:P02786 647..649
Blue background indicates that the domain is not in the aligned region.

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