DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10062 and Tfr2

DIOPT Version :9

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_030110515.1 Gene:Tfr2 / 50765 MGIID:1354956 Length:840 Species:Mus musculus


Alignment Length:229 Identity:47/229 - (20%)
Similarity:94/229 - (41%) Gaps:65/229 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ENYLLINSHYDSVPGSPGAGDDGSMVVTMLEVMRV---IAKSGDPLAHPIVFL-FNGAEENPLQA 210
            ::|::|.:..|:  ..|||.........:||::|.   :..:|......::|: ::|.:...:.|
Mouse   461 DHYVVIGAQRDA--WGPGAAKSAVGTAILLELVRTFSSMVSNGFRPRRSLLFISWDGGDFGSVGA 523

  Fly   211 SHAFITQHKWAK------NCKAL--INLDSAGSGGREILFQSGPNH----PWLMNYYRNV----- 258
            :       :|.:      :.||:  ::||::..|       .|..|    |.|::...|:     
Mouse   524 T-------EWLEGYLSVLHLKAVVYVSLDNSVLG-------DGKFHAKTSPLLVSLIENILKQVD 574

  Fly   259 -PHPFANTLAE-----------ELFQAGYIPSDTDFRIFRDYGGVPGLDMAYIFNGYVY---HTK 308
             |:....||.|           |:.|.  :|.|:....|..:.|||.::.:::.:..||   |||
Mouse   575 SPNHSGQTLYEQVALTHPSWDAEVIQP--LPMDSSAYSFTAFAGVPAVEFSFMEDDRVYPFLHTK 637

  Fly   309 YN-----------RINAFPRASFQHTGDNVLSLA 331
            .:           |:.|..:|..|..|..::.|:
Mouse   638 EDTYENLHKMLRGRLPAVVQAVAQLAGQLLIRLS 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:193497 47/229 (21%)
Tfr2XP_030110515.1 PA_TfR 248..438 CDD:239043
M28_TfR 446..679 CDD:349946 47/229 (21%)
TFR_dimer 706..830 CDD:367885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2234
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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