DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10062 and Tfr2

DIOPT Version :10

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_006249178.1 Gene:Tfr2 / 288562 RGDID:1310152 Length:838 Species:Rattus norvegicus


Alignment Length:195 Identity:41/195 - (21%)
Similarity:82/195 - (42%) Gaps:54/195 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ENYLLINSHYDSVPGSPGAGDDGSMVVTMLEVMRV---IAKSGDPLAHPIVFL-FNGAEENPLQA 210
            ::|::|.:..|:  ..|||.........:||::|.   :..||......::|: ::|.:...:.|
  Rat   459 DHYVVIGAQRDA--WGPGAAKSAVGTAILLELVRTFSSMVSSGFRPRRSLLFISWDGGDFGSVGA 521

  Fly   211 SHAFITQHKWAK------NCKAL--INLDSAGSGGREILFQSGPNH----PWLMNYYRNV----- 258
            :       :|.:      :.||:  ::||::..|       .|..|    |.|::...|:     
  Rat   522 T-------EWLEGYLSVLHLKAVVYVSLDNSVLG-------DGKFHAKTSPLLVSLIENILKQVD 572

  Fly   259 -PHPFANTLAE-----------ELFQAGYIPSDTDFRIFRDYGGVPGLDMAYIFNGYVY---HTK 308
             |:....||.:           |:.|.  :|.|:....|..:.|||.::.:::.:..||   |||
  Rat   573 SPNHSGQTLYDQVAFTHPSWDAEVIQP--LPMDSSAYSFTAFAGVPAVEFSFMEDDRVYPFLHTK 635

  Fly   309  308
              Rat   636  635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:349872 41/195 (21%)
Tfr2XP_006249178.1 Zinc_peptidase_like 179..>232 CDD:472712
PA_TfR 246..436 CDD:239043
M28_TfR 444..677 CDD:349946 41/195 (21%)
TFR_dimer 704..828 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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