DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10062 and LOC100330918

DIOPT Version :9

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:XP_002665878.5 Gene:LOC100330918 / 100330918 -ID:- Length:354 Species:Danio rerio


Alignment Length:383 Identity:98/383 - (25%)
Similarity:173/383 - (45%) Gaps:54/383 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 MLCILFDIVALIVNLVTKWHRKA--------YLFAIAVTVCQILPLVFFTYLCTVALVTLMPMQG 567
            |:.::|.:::.:: |.|.:..|.        ||..::|      |.|...:|..|......|:.|
Zfish     1 MMMVVFPLLSKVL-LRTHFRAKGASLQYSVFYLMGLSV------PYVHIMFLIWVVFEIFTPILG 58

  Fly   568 RSGSSTNPDMVIAALVWLFSLMFAGFIAPLIMFFRKTRTIVLCFLG--ITILFIIIAVTNAGFPY 630
            |||:...||:|:|||:.|.:::.:.::..|:.....|:. :|..||  ..::|:::. ....|||
Zfish    59 RSGTEIPPDVVLAALITLAAVILSSYLMHLLYLSCSTKR-MLAALGSVFAVMFVLVG-CGLFFPY 121

  Fly   631 KEKTS---PQRYSLIHAHRRLHNADGSTRIDESGLYIYPQDRRFGIAKDNIAAIGEAHQVSDF-- 690
            ....|   |:|..:.|..|..|..|||....:|||:|...|.   ....:|:|  ...|::|.  
Zfish   122 SADPSSPRPKRVFVQHTTRVFHALDGSVERSDSGLWINSLDY---TGMQHISA--HVPQLNDSIR 181

  Fly   691 --CDEEM-FCGMPLYNHRWNKARQY---SMWI--ETSESPEIPTEYPMLVLQDSSELETSAQRRF 747
              |...: :||.|     |....::   ..|.  ..:.|||.|.|:.:|..| .||..|   .|.
Zfish   182 TRCQHTLPYCGFP-----WFLPVKFLVKKSWYLPAPAVSPEAPLEFRLLSRQ-QSEWGT---LRL 237

  Fly   748 NFTLAGPSHMGIFINVKNDARILNWSFNDTLIREQAEPPYMVYFSYGLDDSPLEFTIDVE--LND 810
            :|...||:||.:::...:.|.::.|||.|...|......|.:::|:|.|.....|:::|:  ::|
Zfish   238 SFEAKGPTHMSLYLLPVSGASLIGWSFGDGTPRFDLSGEYFIFYSHGTDAPAWRFSLEVQPGVSD 302

  Fly   811 YLQKTTSTFDTPTLEIGIGGHWVTQDITAIEKLSSYINRFPSYAYIQGWVGTYETWYF 868
                  ::.|...|.:.|..|:.:........|.:.|:.||.:|:...|..||..:.:
Zfish   303 ------ASPDEGLLSLAISAHYFSGPDKHSPPLHTLISTFPDWAFPSAWSSTYHMYRY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:193497
LOC100330918XP_002665878.5 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D152011at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.