DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10051 and Folh1

DIOPT Version :9

Sequence 1:NP_611414.1 Gene:CG10051 / 37222 FlyBaseID:FBgn0034437 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_058050.3 Gene:Folh1 / 53320 MGIID:1858193 Length:752 Species:Mus musculus


Alignment Length:643 Identity:115/643 - (17%)
Similarity:201/643 - (31%) Gaps:207/643 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ISYTNLSNVVVKISQKSSDNENYLLVNSHYDSEV------QTPAAGDDGVMVVV----------- 181
            :....||:..|.:|..:..:.||:.:.:...:|:      :.|..|.:.:..||           
Mouse   107 LDLVELSHYDVLLSYPNKTHPNYISIINEDGNEIFKTSLSEQPPPGYENISDVVPPYSAFSPQGT 171

  Fly   182 -----------------MLETLRVISRSERTL--THPVVFLFNGAEEACMLGSHGFITQHKWSKN 227
                             .||....||.|.:.:  .:..||..|..:.|.:.|:.|.|.   :|..
Mouse   172 PEGDLVYVNYARTEDFFKLEREMKISCSGKIVIARYGKVFRGNMVKNAQLAGAKGMIL---YSDP 233

  Fly   228 CKALV----------NLDSTGAGGREVLFQTGPNHPWLAKYYQA----------------SVP-H 265
            ....|          ||...|.....||...|...| |...|.|                |:| |
Mouse   234 ADYFVPAVKSYPDGWNLPGGGVQRGNVLNLNGAGDP-LTPGYPANEHAYRHELTNAVGLPSIPVH 297

  Fly   266 PYAQTLAEELFQHNFIPSDTD------------------------------------FRIFRDYG 294
            |.....|::|.:|...|:..|                                    .||:...|
Mouse   298 PIGYDDAQKLLEHMGGPAPPDSSWKGGLKVPYNVGPGFAGNFSTQKVKMHIHSYTKVTRIYNVIG 362

  Fly   295 GVPGL---DMASVMNGYVYHTEFDNFKNVE--------------YGTYQSTGENVLP---LIWAL 339
            .:.|.   |...::.|   |.:...|..::              :||.:..|..  |   :::|.
Mouse   363 TLKGALEPDRYVILGG---HRDAWVFGGIDPQSGAAVVHEIVRSFGTLKKKGRR--PRRTILFAS 422

  Fly   340 ANAPE--LDNTTAYEKGHTVYYDFLGWFMMTYTES-VSIAINVVVSVAAFICIGTSVYIMTL--- 398
            .:|.|  |..:|.:.:.|:......|   :.|..: .||..|..:.|.....:.:.||.:|.   
Mouse   423 WDAEEFGLLGSTEWAEEHSRLLQERG---VAYINADSSIEGNYTLRVDCTPLMYSLVYNLTKELQ 484

  Fly   399 --DNGAD-----------APKAVVLRFAIIFLVQAGTLFVACGLTLLVAVFMQGVGLA------- 443
              |.|.:           :|....:....|..:.:|..|         .||.|.:|:|       
Mouse   485 SPDEGFEGKSLYDSWKEKSPSPEFIGMPRISKLGSGNDF---------EVFFQRLGIASGRARYT 540

  Fly   444 ESWYYGKWMAFGLYFCTLFFAFGILPATY---------IGFTKRKTNMKLDQTIACFMHAQCILL 499
            ::|...|..::.||. :::..:.::...|         :...:.....:|..:|......|...:
Mouse   541 KNWKTNKVSSYPLYH-SVYETYELVVKFYDPTFKYHLTVAQVRGAMVFELANSIVLPFDCQSYAV 604

  Fly   500 ALLCIIMTIMGI-------RSSYFPMVGIFFYAISVLVQIVLKLT-----LKKSYFVTVHLLFQV 552
            ||.....||..|       ..:|.......|.|::....:..|..     |.||..:.:.::...
Mouse   605 ALKKYADTIYNISMKHPQEMKAYMISFDSLFSAVNNFTDVASKFNQRLQELDKSNPILLRIMNDQ 669

  Fly   553 LPFF--------------FYTYICYATLVTFVPMEGRDGPESSPDIMISVFIIATAIN 596
            |.:.              ||.:|.||.     ....:...||.|.|..::|.|::.:|
Mouse   670 LMYLERAFIDPLGLPGRPFYRHIIYAP-----SSHNKYAGESFPGIYDALFDISSKVN 722

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG10051NP_611414.1 M28_Fxna_like 62..369 CDD:193497 63/355 (18%)
MATE_like 361..>604 CDD:298879 53/295 (18%)
Folh1NP_058050.3 Zinc_peptidase_like 70..>116 CDD:301362 2/8 (25%)
PA_GCPII_like 122..348 CDD:239036 40/229 (17%)
NAALADase 276..589 53/330 (16%)
M28_PSMA_like 356..597 CDD:193568 45/258 (17%)