DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11961 and TRE1

DIOPT Version :9

Sequence 1:NP_001246418.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_015149.1 Gene:TRE1 / 855927 SGDID:S000006097 Length:783 Species:Saccharomyces cerevisiae


Alignment Length:122 Identity:30/122 - (24%)
Similarity:49/122 - (40%) Gaps:37/122 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 SGTANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKI-------------SPKNTNSTTYLLVNS 187
            ||:.||..:|:.|.:.       :.....:.:||.||             :|:  ||.:|   .:
Yeast   382 SGSLNDCRLDLLVQTA-------IRERHPVHDIVGKIEGSEQAGRAIVIAAPR--NSASY---GT 434

  Fly   188 HYDSVPAGPGAGDDGSMVATMMEVL--RVLAKSD-KPLKNPVVFLFNGAEENPLQAS 241
            .|.|.         |::|...:..|  .::.|.| |||:|.....|.|:|.|...|:
Yeast   435 MYPSF---------GTVVLLSLIQLYQEMVYKFDWKPLRNIYFISFGGSEFNEAGAT 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_001246418.1 M28_Fxna_like 91..395 CDD:193497 30/122 (25%)
TRE1NP_015149.1 PA 221..374 CDD:333703
M28_PMSA_TfR_like 402..617 CDD:349871 24/95 (25%)
TFR_dimer 642..769 CDD:398094
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2234
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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