DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11961 and AT4G07670

DIOPT Version :10

Sequence 1:NP_725876.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_192510.1 Gene:AT4G07670 / 826236 AraportID:AT4G07670 Length:280 Species:Arabidopsis thaliana


Alignment Length:242 Identity:50/242 - (20%)
Similarity:75/242 - (30%) Gaps:81/242 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YEAQPNGCERAFVQGNK-----IKWF----WAPAFFGF----------------WLLLYVTISIP 73
            |||   |.....:..||     .:||    |.|. .||                |      .|:.
plant    54 YEA---GAVGVVIYTNKRDYGGDEWFPASKWMPP-SGFQVGTVYNGLGDPTTPGW------ASVD 108

  Fly    74 ACHRLPRPLTIQDEETHPDQFIAERAEKNLRELVSLGPRVVGSRQNEMAALKMLSQKMQKIRSGT 138
            .|.||      .||..            .|...|.|.|.:..|..:....||.:           
plant   109 GCERL------SDEAV------------ELSGDVPLIPSLPVSAADAEVILKTI----------- 144

  Fly   139 ANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKISPKNTNSTTYLLVNSHYDS---VPAGPGAGD 200
            ..|:.....:.:.||:       ...|||::..|..:. ....|:::.:|.|:   ....|.:|.
plant   145 VGDVGPGPGILNLSYI-------VTKIQNVIGVIEGEE-EPDRYVILRNHRDTWTFRAVDPNSGT 201

  Fly   201 DGSMVATMMEVLRVLAKSDKPLK-----NPVVFLFN-GAEENPLQAS 241
            ...|.|:...:..:..:.||..|     ...:.|.| .|||..|.:|
plant   202 AVLMEASKSYLQHIAQRLDKLQKRGWKPRRTIILCNWDAEEYGLVSS 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_725876.1 M28_Fxna_like 91..395 CDD:349872 31/160 (19%)
MFS <539..>658 CDD:475125
AT4G07670NP_192510.1 PA <10..150 CDD:333703 27/134 (20%)
Zinc_peptidase_like <163..>248 CDD:472712 20/85 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.