DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11961 and Tfr2

DIOPT Version :9

Sequence 1:NP_001246418.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:XP_030110515.1 Gene:Tfr2 / 50765 MGIID:1354956 Length:840 Species:Mus musculus


Alignment Length:628 Identity:129/628 - (20%)
Similarity:197/628 - (31%) Gaps:257/628 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GNKIKWFWAPA---------------FFGFWLLLYVTISIPACHRLPRPLTIQDEETHPD----- 92
            |..|...||.|               |.|.:||.||... .:|......:.:.||:.:|:     
Mouse   107 GRSIPIPWAAAGRKAAPYLVLITLLIFTGAFLLGYVAFR-GSCQACGDSVLVVDEDVNPEDSGRT 170

  Fly    93 ------------QFIAE-RAEKNLRELVSLGPRVVGSRQNEMAAL------KMLSQKMQKIRSGT 138
                        :|:.| |.|..:| |.||..||.||.:  ||.|      |:..||:..:.:.|
Mouse   171 TLYWSDLQAMFLRFLGEGRMEDTIR-LTSLRERVAGSAR--MATLVQDILDKLSRQKLDHVWTDT 232

  Fly   139 ANDIEVDVQV---ASGSYVHWSMVNMYQSIQNIVVKISPK------NTNSTTYLLVNSHYDSVPA 194
            .   .|.:|.   |..:.:||  |:...|:|..:....|:      .|.:.|..||.:||     
Mouse   233 H---YVGLQFPDPAHANTLHW--VDADGSVQEQLPLEDPEVYCPYSATGNATGKLVYAHY----- 287

  Fly   195 GPGAGDD------------GSMVATMMEVL----RVLAKSDKPLKNPVVFL----FNGAEENPLQ 239
              |..:|            ||::...:.:.    :|....|...:..:::.    |:.....|..
Mouse   288 --GRSEDLQDLKAKGVELAGSLLLVRVGITSFAQKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGL 350

  Fly   240 ASHAFITQHKWAKYCKALINLDSCGNG-------------------------------GREILFQ 273
            :||..:..|         ::|   |.|                               ..:|..|
Mouse   351 SSHQAVYGH---------VHL---GTGDPYTPGFPSFNQTQFPPVESSGLPSIPAQPISADIADQ 403

  Fly   274 -----SGPNHPWLMKNYRRAIKHPYASTMGEE--LFQHNFIPSDTDFRIFR--------DHGSV- 322
                 :||..|...|.:...  .||....|.:  |..:|...|.....||.        ||..| 
Mouse   404 LLRKLTGPVAPQEWKGHLSG--SPYRLGPGPDLRLVVNNHRVSTPISNIFACIEGFAEPDHYVVI 466

  Fly   323 --------PG-----------LDMAYTY-----NGFVYHTRHDKAEIF---PRGSFQHTGDNLLA 360
                    ||           |::..|:     |||    |..::.:|   ..|.|...|     
Mouse   467 GAQRDAWGPGAAKSAVGTAILLELVRTFSSMVSNGF----RPRRSLLFISWDGGDFGSVG----- 522

  Fly   361 LVRQIANSPEIENSAKYAKGHTIYFDVMGWFLVFYTETEGVILN----------VIVSLVSIGIC 415
                         :.::.:|   |..|:....|.|...:..:|.          ::|||:     
Mouse   523 -------------ATEWLEG---YLSVLHLKAVVYVSLDNSVLGDGKFHAKTSPLLVSLI----- 566

  Fly   416 GYAFKLMSVNSGIKLEKILKKV------GHTLLVQILSVVVGAILPVLLGLFMDAVHLPLSWFSN 474
                           |.|||:|      |.||..|:..........|:..|.||:     |.:| 
Mouse   567 ---------------ENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDS-----SAYS- 610

  Fly   475 SWLILGLYFTTFFFGLAIVPALYFHWTKRDKLPIGQRVQLLLH 517
                    ||.|    |.|||:.|.:.:.|      ||...||
Mouse   611 --------FTAF----AGVPAVEFSFMEDD------RVYPFLH 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_001246418.1 M28_Fxna_like 91..395 CDD:193497 82/430 (19%)
Tfr2XP_030110515.1 PA_TfR 248..438 CDD:239043 36/212 (17%)
M28_TfR 446..679 CDD:349946 54/259 (21%)
TFR_dimer 706..830 CDD:367885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2234
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.