DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EndoB and sh3glb2

DIOPT Version :9

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_012823789.1 Gene:sh3glb2 / 548519 XenbaseID:XB-GENE-943848 Length:399 Species:Xenopus tropicalis


Alignment Length:410 Identity:170/410 - (41%)
Similarity:238/410 - (58%) Gaps:47/410 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NFNVKNLVKEAGSTISRVVQLTEEKLGTTERTEYDLHFQNLAERADVTKTWTEKIVRDTESVLIP 71
            :|:||.|..:||...||.||.|:|.||..|:||.|.||:||..|||.||.|||||:|.||.:|.|
 Frog     2 DFSVKKLASDAGVFFSRAVQFTQENLGQAEKTELDAHFENLLTRADNTKNWTEKILRQTEVLLQP 66

  Fly    72 NPQNRVEDFIFEKIEKSKPKRLSNLEHLALDMIEAGGDFGQDLPYGQALIKVGQAEQKLGQCEHD 136
            :|..|||:|::||:::..|.|::..|.|...|.||..|||...||||.|||||:.::.||..|.|
 Frog    67 SPSARVEEFLYEKLDRKIPSRVTTAELLGQYMTEAANDFGPSTPYGQTLIKVGETQKHLGTAERD 131

  Fly   137 FIATSGICFTQPLRKFLDGEMKTIGKERGILETKRLDLDACKNRVKKARSMLGQQSKDG------ 195
            ||.:|.|.|..|||.||:|:.|||.|||.||:.:||||||||.|:|||::...:.:.:|      
 Frog   132 FIHSSSINFLTPLRNFLEGDWKTISKERRILQNRRLDLDACKARLKKAKAAEAKAALEGDALPDF 196

  Fly   196 ---------ISPEA------VLEQAERDLRVAQAEFDRQAEITKLLLDGISTSQASHLRHLHAFI 245
                     :|..|      .:::||.:|||||.|||||||:|:|||:|||::..:|||.||.|.
 Frog   197 QETRPRNYILSASASALWSDEVDKAEHELRVAQTEFDRQAEVTRLLLEGISSTHVNHLRCLHEFA 261

  Fly   246 QTQVRYYKQCGDVMEQLQRELANLGG---PTPYI--------PLDVNEASASKSNISSGAAARGP 299
            :.|..|:.|....|..||::|.:...   |.|.:        ||..:...|:...:.  .|:..|
 Frog   262 EAQATYFAQSYQYMVDLQKQLGSSRAELFPAPVVGNTDPASPPLSTSPPPATLPVLQ--VASSNP 324

  Fly   300 GNNHSANMAATGHKPNQPMHV--STDQMQRARVLCSYDAKDHTELNLSANEVIFVTECSPVNEDY 362
                       |..|..|:.|  .....::||||..|:|.|..||:|||:|:|.|.....::.|:
 Frog   325 -----------GEVPLNPVEVPPPVSGTRKARVLYDYEAADSKELSLSADELITVYSLPGLDPDW 378

  Fly   363 MYGKQGLLKGLVPRAFVEML 382
            :.|::|..||.||..::|:|
 Frog   379 LIGERGNKKGKVPVTYLELL 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 125/260 (48%)
SH3_Endophilin_B 327..378 CDD:212736 22/50 (44%)
sh3glb2XP_012823789.1 BAR_Endophilin_B2 21..282 CDD:153301 125/260 (48%)
SH3 343..397 CDD:388381 22/53 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2155
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2725
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D347900at33208
OrthoFinder 1 1.000 - - FOG0002653
OrthoInspector 1 1.000 - - otm47459
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1759
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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