DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoB and sorbs3

DIOPT Version :10

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001417908.1 Gene:sorbs3 / 541478 ZFINID:ZDB-GENE-050327-1 Length:695 Species:Danio rerio


Alignment Length:177 Identity:46/177 - (25%)
Similarity:68/177 - (38%) Gaps:45/177 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 SPEAVL------EQAERDLRVAQAEFDRQAEITKLLLDGIS-----TSQASHLRHLHAFIQTQVR 250
            |||..|      .|:...|..|||...:|.....|...|.:     ||:.:.|.|||...:|..|
Zfish   517 SPEPQLSHHKQSSQSRSPLSHAQATSPKQPTNHFLFSPGPTSSTSPTSKRTGLMHLHNTPETDSR 581

  Fly   251 Y-YKQCGDVMEQLQRELANLGGP-------TPYIPLDVNEASASKSNISSGAAARGPGNNHSANM 307
            . ......|::.||       ||       :|||..||....:|:.|....:.::.|     |||
Zfish   582 SPVSPSSHVLQSLQ-------GPGLPAKHASPYITQDVARTQSSQPNTVISSTSQSP-----ANM 634

  Fly   308 AATGHKPNQPMHVSTDQMQRARVLCSYDAKDHTELNLSANEVIFVTE 354
               ||. .||.          :.:.:|..::..||.|...:::.|.|
Zfish   635 ---GHL-RQPY----------KAVYNYKPQNRDELELREGDIVQVLE 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 23/80 (29%)
SH3_Endophilin_B 327..378 CDD:212736 6/28 (21%)
sorbs3NP_001417908.1 Sorb 117..165 CDD:470634
SH3_Vinexin_1 349..403 CDD:212854
SH3_Sorbs_2 424..478 CDD:212716
PHA03269 472..>589 CDD:165527 20/71 (28%)
SH3_Vinexin_3 638..695 CDD:212851 8/40 (20%)
Blue background indicates that the domain is not in the aligned region.

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