DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EndoB and Sh3glb2

DIOPT Version :9

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:XP_006233878.1 Gene:Sh3glb2 / 311848 RGDID:1305886 Length:454 Species:Rattus norvegicus


Alignment Length:457 Identity:165/457 - (36%)
Similarity:245/457 - (53%) Gaps:86/457 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NFNVKNLVKEAGSTISRVVQLTEEKLGTTERTEYDLHFQNLAERADVTKTWTEKIVRDTESVLIP 71
            :||:|.|..:||...:|.||.||||.|..|:||.|.||:||..|||.||.|||:|:|.||.:|.|
  Rat     2 DFNMKKLASDAGIFFTRAVQFTEEKFGQAEKTELDAHFENLLARADSTKNWTERILRQTEVLLQP 66

  Fly    72 NPQNRVEDFIFEKIEKSKPKRLSNLEHLALDMIEAGGDFGQDLPYGQALIKVGQAEQKLGQCEHD 136
            ||..|||:|::||:::..|.|::|.|.||..|.||..:.|.:.|||:.|:||.:||::||..|.|
  Rat    67 NPSARVEEFLYEKLDRKVPSRVTNGELLAQYMAEAASELGPNTPYGKTLMKVSEAEKRLGAAERD 131

  Fly   137 FIATSGICFTQPLRKFLDGEMKTIGKERGILETKRLDLDACKNRVKKARSMLGQQSKDG------ 195
            ||.|:.:.|..|||.||:|:.|||.|||.:|:.:||||||||.|:|||::...:.:.:|      
  Rat   132 FIHTASLSFLTPLRNFLEGDWKTISKERRLLQNRRLDLDACKARLKKAKAAEAKATCEGDTVPDF 196

  Fly   196 -----------------------------------------------ISPEAVL----------- 202
                                                           ::|...|           
  Rat   197 QETRPRNYILSASASATLDDTSRSPPWAEWKEKHPGGWRLPCFFLLPLTPSVTLARGCLSLPEDR 261

  Fly   203 -------EQAERDLRVAQAEFDRQAEITKLLLDGISTSQASHLRHLHAFIQTQVRYYKQCGDVME 260
                   ::||::||.||.|||||||:|:|||:|||::..:|||.||.|:::|..||.||...|.
  Rat   262 KLWNDEVDKAEQELRAAQTEFDRQAEVTRLLLEGISSAHVNHLRCLHEFVKSQTTYYAQCYRHML 326

  Fly   261 QLQRELANLGG---PTPYIPLDVNEASASKSNISSGAAARGPGNNHSANMAATGHKPNQPMHVST 322
            .||::|.:..|   |..::......:....|...:..||..|.....|.:|     |.:...:..
  Rat   327 DLQKQLGSSQGAIFPGTFVGTTEPASPPLSSTSPTTTAATMPVVPTGAGLA-----PPEEAALCL 386

  Fly   323 DQM-------QRARVLCSYDAKDHTELNLSANEVIFVTECSPVNEDYMYGKQGLLKGLVPRAFVE 380
            :::       ::||||..|:|.|.:||.|.|:|:|.|.....::.|::.|::|..||.||..::|
  Rat   387 EEVAPPASGTRKARVLYDYEAADSSELALLADELITVYSLPGMDPDWLIGERGNKKGKVPVTYLE 451

  Fly   381 ML 382
            :|
  Rat   452 LL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 124/310 (40%)
SH3_Endophilin_B 327..378 CDD:212736 21/50 (42%)
Sh3glb2XP_006233878.1 BAR 21..332 CDD:416402 124/310 (40%)
SH3_Endophilin_B2 398..452 CDD:212877 21/53 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 247 1.000 Domainoid score I2087
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2640
OMA 1 1.010 - - QHG49388
OrthoDB 1 1.010 - - D347900at33208
OrthoFinder 1 1.000 - - FOG0002653
OrthoInspector 1 1.000 - - otm44412
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14167
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1759
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

Return to query results.
Submit another query.