DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoB and Sh3rf2

DIOPT Version :9

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001029359.1 Gene:Sh3rf2 / 307472 RGDID:1308415 Length:735 Species:Rattus norvegicus


Alignment Length:106 Identity:21/106 - (19%)
Similarity:46/106 - (43%) Gaps:19/106 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 DVNEASASKSNISSGAAARGPGNNHSANMAATGHKPNQPMHVSTDQMQRARVLCSYDAKDHTELN 343
            |..:|.:|..::.:.....||                 .:.:..|.:.||:.||:|..|:..:|.
  Rat    98 DNRKAKSSPRSLQASPFRLGP-----------------TVRIHMDGVPRAKALCNYRGKNPGDLK 145

  Fly   344 LSANEVIFVTECSPVNEDYMYGKQGLLKGLVPRAFVEMLDE 384
            .:..:||.:..  .::|::..|:...:.|..|.:.||::.:
  Rat   146 FNKGDVILLQR--QLDENWYQGEINGVSGFFPASSVEVIKQ 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278
SH3_Endophilin_B 327..378 CDD:212736 13/50 (26%)
Sh3rf2NP_001029359.1 RING-HC_SH3RF2 11..55 CDD:319663
SH3_SH3RF2_1 128..181 CDD:212862 14/54 (26%)
SH3_SH3RF2_2 191..247 CDD:212865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..301
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..373
Interaction with PAK4. /evidence=ECO:0000250|UniProtKB:Q8TEC5 373..466
SH3_SH3RF2_3 387..441 CDD:212718
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 472..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 612..637
Interaction with PPP1CA. /evidence=ECO:0000250 647..652
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343647
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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