DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoB and Sh3rf2

DIOPT Version :10

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_001029359.1 Gene:Sh3rf2 / 307472 RGDID:1308415 Length:735 Species:Rattus norvegicus


Alignment Length:306 Identity:74/306 - (24%)
Similarity:109/306 - (35%) Gaps:93/306 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FEKIEKSKPKRLSNLEHLALDMIEAGGDFGQDLPYGQALIKVGQ--AEQKLGQCEHDFIATSGIC 144
            |:..:|.|.:....|..|..|:|             ..:.:|.:  ||.|||    |.:....|.
  Rat   198 FDLRDKDKSENQDCLTFLKDDVI-------------TVISRVDENWAEGKLG----DKVGIFPIL 245

  Fly   145 FTQP---LRKFLDGEMKTIGKERG--ILETKRLDLDACKNRVKKA-----RSMLGQQSKDGISPE 199
            |.:|   .|..|:       |.:|  :..||.|.|.:..:|.|..     |...|.:.|.  |.:
  Rat   246 FVEPNLSARHLLE-------KSKGHQLSRTKHLSLMSSPSRGKATNTSTLRKSPGSRRKG--SGQ 301

  Fly   200 AVLEQAERDLR--VAQAEFDRQAEITKLLLDGISTSQASHLRHLHAFIQTQVRYYKQCGDVMEQL 262
            ..:..|...|.  |...|..:..||:..:|  ||::..|.|              .|.||     
  Rat   302 FAMTTALNTLNRMVHSPEGHQMVEISTPVL--ISSTSPSML--------------TQHGD----- 345

  Fly   263 QRELANLGGPTPYIPLDVNEASASKSNISSGAAARGPGNNHSANMAATGHKPNQPMHVSTDQMQR 327
                          ..|...:||.:.:.|..|.| .||  ||..|.:.   |:...|:||:... 
  Rat   346 --------------RADFPASSAGQVSTSHPAPA-SPG--HSTAMVSV---PSSQQHLSTNMFV- 389

  Fly   328 ARVLCSYDAKDHTELNLSANEVIFVTECSPVNEDYMYGKQGLLKGL 373
              .|.:|.|:...||:|...|.|.|.   ..|:|      |.|:|:
  Rat   390 --ALHTYSAQGPEELDLKKGEGIRVL---GKNQD------GWLRGV 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 45/197 (23%)
SH3_Endophilin_B 327..378 CDD:212736 14/47 (30%)
Sh3rf2NP_001029359.1 RING-HC_SH3RF2 11..55 CDD:438407
SH3_SH3RF2_1 128..181 CDD:212862
SH3_SH3RF2_2 191..247 CDD:212865 15/65 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..301 11/42 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..373 15/73 (21%)
Interaction with PAK4. /evidence=ECO:0000250|UniProtKB:Q8TEC5 373..466 19/67 (28%)
SH3_SH3RF2_3 387..441 CDD:212718 14/50 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 472..534
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 612..637
Interaction with PPP1CA. /evidence=ECO:0000250 647..652
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 649..735
Blue background indicates that the domain is not in the aligned region.

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