DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadvl and caiA

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_414581.1 Gene:caiA / 949064 ECOCYCID:EG11560 Length:380 Species:Escherichia coli


Alignment Length:406 Identity:117/406 - (28%)
Similarity:199/406 - (49%) Gaps:54/406 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ENESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVNDAARNDANSKIDDTTS 106
            |.|.|:|.|                     :||..|  :.:|.:|::.      |.:|...:...
E. coli     8 EQELFVAGI---------------------RELMAS--ENWEAYFAEC------DRDSVYPERFV 43

  Fly   107 TALWELGAFGIQVPSEFGGLGLNNTQYGRLCAI-VGVNDLGLGITIGAHQSIGFKGILLYGTPEQ 170
            .||.::|...:.:|.|.|||   :..:..|.|: :.:..||....:......||...|..||.||
E. coli    44 KALADMGIDSLLIPEEHGGL---DAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQ 105

  Fly   171 KEKYLP-KVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSADGKHYVLNGSKIWISNGGIAEIMTV 234
            .:|.:. :...:|::.: |:|||.:|||.||::....: .:||.| |||||.:|::......:.|
E. coli   106 IDKIMAFRGTGKQMWNS-AITEPGAGSDVGSLKTTYTR-RNGKIY-LNGSKCFITSSAYTPYIVV 167

  Fly   235 FAQTEQVDPKTGEKKDK--VTAFIVERSFGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVLG 297
            .|       :.|...||  .|.:.|:.|..|:.....| |:|::..:..|:.|:||::..:::.|
E. coli   168 MA-------RDGASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFG 224

  Fly   298 KEGDGFKVAMNILNNGRFGMGATLSGTMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNIL 362
            :||:||.......::.||.:..|..||.....|.|..:||.|||||:.:..:..||||.|.|.|.
E. coli   225 REGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIK 289

  Fly   363 QYATESMAFTISQNMDAG---SKDYHLEAAISKIYASESAWYVCDEAIQILGGMGYMVDNGLERV 424
            ..:.::|.:..:...|.|   |.|    ||:.|.:.:.:|:.|.|.|:|:|||:|...::.:.|.
E. coli   290 LNSMKNMLYEAAWKADNGTITSGD----AAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRF 350

  Fly   425 LRDLRIFRIFEGTNDI 440
            .||||:.|:..|::::
E. coli   351 WRDLRVDRVSGGSDEM 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 115/403 (29%)
caiANP_414581.1 PRK03354 1..380 CDD:179566 117/406 (29%)

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