DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadvl and fadE

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_414756.2 Gene:fadE / 949007 ECOCYCID:G6105 Length:814 Species:Escherichia coli


Alignment Length:660 Identity:164/660 - (24%)
Similarity:256/660 - (38%) Gaps:157/660 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PKLGAESNRSKEKASENESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVND 91
            |:|.||.....:...|....|||.|:   ::.::...|..|.|..||         .|||:.:  
E. coli   118 PRLTAEEQAFLDGPVEEACRMANDFQ---ITHELADLPPELWAYLKE---------HRFFAMI-- 168

  Fly    92 AARNDANSKIDDTTSTALWELGAFGIQVPSEFGGLGLNNTQYGR-LCAIVGVNDLGLGITIGAHQ 155
                                       :..|:|||..:.....| |..:.||:.: |.||:|...
E. coli   169 ---------------------------IKKEYGGLEFSAYAQSRVLQKLSGVSGI-LAITVGVPN 205

  Fly   156 SIGFKGILL--YGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSA---DGKHYV 215
            |:| .|.||  |||.|||:.|||::|..|....||||.|.:|||||:|....:...   .|:..:
E. coli   206 SLG-PGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVL 269

  Fly   216 ---LNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKD-KVTAFIVERSFGGV------------ 264
               |..:|.:|:...||.::.:..:....:...|..:| .:|..::..:..||            
E. coli   270 GMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVP 334

  Fly   265 -TNGPPEKKMGIKASNTAEVYFEDVKIPIENVLG---KEGDGFKVAMNILNNGRFGMGATL---- 321
             .|||...|              ||.:||:.::|   ..|.|:::.:..|:.||   |.||    
E. coli   335 FQNGPTRGK--------------DVFVPIDYIIGGPKMAGQGWRMLVECLSVGR---GITLPSNS 382

  Fly   322 SGTMKKCIEQATEHANNRVQFGQKLKNYGSIQEKLAQMNILQYATESMAFTISQNMDAGSKDYHL 386
            :|.:|........:|:.|.||...:.....|:|.||::....|..::.|..|:..:..|.|...|
E. coli   383 TGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVL 447

  Fly   387 EAAISKIYASESAWYVCDEAIQILGGMGYMV--DNGLERVLRDLRIFRIFEGTNDILR-LFIALT 448
             :||.|.:.:........:|:.|.||.|.|:  .|.|.|..:...|....||.|.:.| :.|...
E. coli   448 -SAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQ 511

  Fly   449 GIQYAGSHLKELQRAFKNPSANL--GLIFKE----ASRRAAS-----TVGLGG------------ 490
            |......::.|...|.||...|.  .|:||.    .|.:..|     |.||..            
E. coli   512 GAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYY 576

  Fly   491 -------------TDLSGHVVGELLPYAKK-TAHCIDLFGQ--SVEELLLRYNKNIVNE------ 533
                         :|:|..|:|..|...:: :|...|:..|  ....:|.||:....||      
E. coli   577 QHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLV 641

  Fly   534 ----QILLTRLANAAIDIYAMVVTQSRSSRAVN--LNL---PTAQHELNMTKALTIQASDRVIKN 589
                |..|.:...|..|:     .|:..:|.|.  ||:   ||.:|.|    |.:.:...:|.|.
E. coli   642 HWGVQDALYQAEQAMDDL-----LQNFPNRVVAGLLNVVIFPTGRHYL----APSDKLDHKVAKI 697

  Fly   590 LQAATSSHHR 599
            ||...::..|
E. coli   698 LQVPNATRSR 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 114/441 (26%)
fadENP_414756.2 FadE_coli 3..814 CDD:439499 164/660 (25%)

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