DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acadvl and acoxl

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_697559.4 Gene:acoxl / 569104 ZFINID:ZDB-GENE-081107-18 Length:652 Species:Danio rerio


Alignment Length:575 Identity:125/575 - (21%)
Similarity:224/575 - (38%) Gaps:116/575 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TNSLIDPFERFFSDVNDAARNDANSKID---------------DTTSTALWELGAFGIQVP--SE 122
            ::||....:..|.::.||.| ||.||.|               |.|:..|:.:    ::.|  .|
Zfish    11 SSSLARYLDGEFWEIKDAFR-DAISKSDLFQSSCYERTLDQNRDLTADRLYHI----LRQPVMKE 70

  Fly   123 FGGLGLNNTQYG------RLCAIVGVNDLGLGITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAE 181
            .....|...|.|      .:..:|...|:..|:.:|....:....:...|:||||.|:...|:..
Zfish    71 HLKNQLKEKQKGFINKSMSITEVVCAADMNTGVKLGVVCGLYGGAVNNLGSPEQKIKFYLPVSEL 135

  Fly   182 QVYAAFALTEPSSGSDAGSIRCRAVKSADGKHYVL-----NGSKIWISNGGIAEIMTVFAQT--- 238
            |....||:||...||:...|...|......:.:::     :..|::|.|........||||.   
Zfish   136 QFTGMFAMTERGHGSNVRGIITEARYDQPTQEFIIHTPSEDAHKMYIGNAMKGNFAAVFAQLIIN 200

  Fly   239 -EQVDPKTGEKKDKVTAFIV----ERS--FGGVTNGPPEKKMGIKASNTAEVYFEDVKIPIENVL 296
             |...|.         .|:|    |..  :.|||....:.|.|:...:...:.|::|:||.||:|
Zfish   201 GESQGPH---------CFVVPIRDENGVMWPGVTVSDMKHKEGLHGVDNGILIFDNVRIPRENLL 256

  Fly   297 GKEG----DG-----------FKVAMNILNNGRFGMGATLSGTMKKCIEQATEHANNRVQFGQKL 346
            ||.|    ||           |...:..|...|.|:.......||..:..|..::::|.|||.|.
Zfish   257 GKFGSVSADGLYSSPALRGNRFNAMLAALTPTRLGLTVQAMAAMKLGLIIAVCYSHSRRQFGPKD 321

  Fly   347 KNYGSIQEKLAQ-MNILQYATESMAFTISQNMDAG--------SKDYHLEAAISKIYA---SESA 399
            :....|.|...| :.::.:.:.::|.|.:....|.        .:|.....|:..:.|   :.|.
Zfish   322 QEEVKIMEHQTQNLRLMPHLSAALALTFTSRYAADLMDDALCKGEDLQSNRALQALVAGLKAYST 386

  Fly   400 W--YVC-DEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFIALTGIQYAGSHLKELQ 461
            |  ..| .:..:..||||:|::|.:..:..|..:|..|||.|.::...:           ::||.
Zfish   387 WANVACLQDCRECTGGMGFMMENRIPSLKCDSDVFVTFEGDNMVMLQVV-----------VRELL 440

  Fly   462 RAFKNPSAN---LGLIFKEASRRAASTVGLGGTDLSGHVVGELLPYAKKTAHCIDLFGQSV---- 519
            ..:.....|   :||| :..:..|:.::.......|...||:|:...|...:...:..:|:    
Zfish   441 TQYTKQMGNNLVMGLI-RNLTSSASDSLRTSFLGFSVDKVGDLMFLLKAVRYRERVLQRSLASRL 504

  Fly   520 --------EELLLRYNK---NIVNEQILLTRLANAAIDIYAMVV--TQSRSSRAV 561
                    ||..:.:|.   :::.  :.:..:....::.:|:.|  .|.:..||:
Zfish   505 YTKVDKNKEEFFMAWNSCLHHVIT--LAMAHIHRVTLEQFALAVQDCQIKEDRAL 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 104/446 (23%)
acoxlXP_697559.4 ACAD 44..625 CDD:447864 114/541 (21%)

Return to query results.
Submit another query.