DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadvl and Acox1

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_059036.1 Gene:Acox1 / 50681 RGDID:619757 Length:661 Species:Rattus norvegicus


Alignment Length:541 Identity:117/541 - (21%)
Similarity:196/541 - (36%) Gaps:121/541 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KEKASE--NESFMANIFRGSLVSSQVFPYPDVLTAEQKELTNSLIDPFERFFSDVNDAARNDANS 99
            ||:||.  |...:.:|..||         |: .|..::|:.|.:::..:....|.|...|:....
  Rat     7 KERASATFNPELITHILDGS---------PE-NTRRRREIENLILNDPDFQHEDYNFLTRSQRYE 61

  Fly   100 KIDDTTSTALWELGAFGIQVPSE---FGGLGLNNTQYGRLCAIVGVNDLGLGITIGAHQSIGFKG 161
            .....::|.:.::..:||..|.|   |..|.|.|.          |..:||      :.|:....
  Rat    62 VAVKKSATMVKKMREYGISDPEEIMWFKKLYLANF----------VEPVGL------NYSMFIPT 110

  Fly   162 ILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSADGKHYVLNGS-----KI 221
            :|..||..|:||::......|:...:|.||...|:....:...|......:.::||..     |.
  Rat   111 LLNQGTTAQQEKWMRPSQELQIIGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKW 175

  Fly   222 WISNGGIAEIMT---VFAQTEQVDPKTGEKKDKVTAFIVE-RSFG------GVTNGPPEKKMGIK 276
            |  .||:.:...   |.||........|     :.||:|. |..|      |:|.|....|.|.:
  Rat   176 W--PGGLGKTSNHAIVLAQLITQGECYG-----LHAFVVPIREIGTHKPLPGITVGDIGPKFGYE 233

  Fly   277 ASNTAEVYFEDVKIPIENVLGK------EGDGFKVAMNILNNG------RFGMGATLSGTMKKC- 328
            ..:...:..::.:||.||:|.|      :|...|...|.|..|      .|.:|.......|.| 
  Rat   234 EMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACT 298

  Fly   329 --IEQATEHANNRVQFGQ---KLKNYGSIQEKLAQMNILQYA-------TESMAFTISQNMDAGS 381
              |..:.....:.::..:   ::.::.:.|.||..:....||       .:.....|::::..|.
  Rat   299 IAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGD 363

  Fly   382 ----KDYHLEAAISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILR 442
                .:.|...|..|.:.:.:|....:|.....||.||...:|:..:.........|||.|.::.
  Rat   364 LSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMM 428

  Fly   443 LFIA----------LTGIQYAG--SHLKELQRAFKNPSANL------------------GLIFKE 477
            |..|          .:|....|  |:|.:|      ||..:                  ||  .|
  Rat   429 LQTARFLMKIYDQVRSGKLVGGMVSYLNDL------PSQRIQPQQVAVWPTMVDINSLEGL--TE 485

  Fly   478 ASR-RAASTVGLGGTDLSGHV 497
            |.: |||..|.:...:|..||
  Rat   486 AYKLRAARLVEIAAKNLQTHV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850 95/465 (20%)
Acox1NP_059036.1 AXO 3..638 CDD:173839 117/541 (22%)
Microbody targeting signal. /evidence=ECO:0000255 659..661
Blue background indicates that the domain is not in the aligned region.

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