DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acadvl and ACOX1

DIOPT Version :10

Sequence 1:NP_611409.2 Gene:Acadvl / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_611264.2 Gene:ACOX1 / 37028 FlyBaseID:FBgn0027572 Length:669 Species:Drosophila melanogaster


Alignment Length:693 Identity:132/693 - (19%)
Similarity:219/693 - (31%) Gaps:227/693 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 VLRKSRTGTTRRSNESIEMQPL--------------HGNATSGGGSGG-----------AGSGGS 636
            :|....|.|.|....|..:..:              :.|....||.||           :|||||
  Fly    84 LLSTGPTATQRNGRRSFHLSAVCDKSSSKDGSSGSNNNNNNPPGGPGGNGNGNNSTTTASGSGGS 148

  Fly   637 AGSGGSKTSKTMLKRMPRVKSDDIHTEDEGKDNDKVPSPIGAGLPLLQRLRLLKEKQDREERAAK 701
            .|:||                     :|.|  |.|.|                      ..:...
  Fly   149 VGAGG---------------------KDGG--NGKEP----------------------PNKKNT 168

  Fly   702 ATAQIISPPHTHVTSAISPQESIQEEPEPE--VIGAGLPLMQRLKLLKAKEDRLAKESQSKVIPI 764
            .:......|.|||.:.:|....::.|....  |:.:.:...:.:|..:.|..|.......|::..
  Fly   169 LSCPKCGDPCTHVETFVSSTRFVKCEKCHHFFVVLSEVDSKKTIKDTETKGARKPPPPPKKIMEY 233

  Fly   765 LNTTGVAGHHAKPTMRVSFKERLRQLHHQDSKHHGESKPSSVPVTIHETTDMKQHLLPIVPSPGS 829
            |:...|....||..:.|:.....::::|.                              :|.|.|
  Fly   234 LDRHVVGQELAKKVLSVAVYNHYKRIYHN------------------------------LPPPAS 268

  Fly   830 KAQPIQQQHHQQQSHHPSKPSTAQSLKDKIRSLGHL---KADDQL-KPWSKLKLATVVSLGGSYT 890
            .|...|||  |||....|:.....    .|..:||.   .|..:: :|        .:..||.:.
  Fly   269 SASSAQQQ--QQQLDSMSRSGDLL----HISGIGHTMMSSAPSEVPRP--------PIGAGGGHG 319

  Fly   891 SLNNAASEESPILKQSKRSRLKTSIPADLNLNSLVSMTPPPISSAPPTTCAPPSSFLPNKILSCA 955
            :.::|....|.:| ..|...||      |..::::.:.|.................:|..|..|.
  Fly   320 AGSSAHQPGSELL-DKKTHELK------LEKSNILMLGPTGSGKTLLAQTIAKCLDVPFAICDCT 377

  Fly   956 ----AGEAASVSDSEVA--------SGSRTQRTTG-------DQGGARAVPARVRMKPKPIKLES 1001
                ||......:|.:|        |..|.|  ||       |:.|  |||...:::        
  Fly   378 TLTQAGYVGEDIESVIAKLLQDANYSVERAQ--TGIVFLDEVDKIG--AVPGIHQLR-------- 430

  Fly  1002 TEPKSYLSIDDLSPEYCGLPFVKKLK--ILNERQKLAELESAIKTR--SLSLDCTDSNTSTASTH 1062
                      |:..|......:|.|:  |:|    :.|..|..|.|  ::.:|.|:.....:..:
  Fly   431 ----------DVGGEGVQQGMLKMLEGTIVN----VPERNSPRKLRGETVQVDTTNILFVASGAY 481

  Fly  1063 DLLDQL-TRSQSE---GSGMAHTVRSKSESPKRSDSNGLLPLSPESNETLERRQLKSILKKLSED 1123
            ..||:| .|..:|   |.||.   .|.||..:.:.::.    ||..|:.:||             
  Fly   482 TGLDRLIARRLNEKYLGFGMP---ASSSEGRRAAQASA----SPMDNDQVER------------- 526

  Fly  1124 KAALEQRPNRENLKKLMRAQTVE-GYVARH-SKFTKSVTFHRNTLSSPPSSAAQCDPIEERSLFP 1186
                     ..||||:.....|| |.:... .:|...|.||               .::...|..
  Fly   527 ---------DANLKKVQAKDLVEFGMIPEFVGRFPVLVPFH---------------SLDVDMLVR 567

  Fly  1187 LLSAQTATGIVPGVPHSVAAAPLATSHVDERLSAVATASIEQE 1229
            :|: :....:||.....:....:..|..||.|..:|..::|::
  Fly   568 ILT-EPRNALVPQYKALLGMDQVELSFTDEALKQIAQLAMERQ 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcadvlNP_611409.2 VLCAD 45..454 CDD:173850
ACOX1NP_611264.2 AXO 8..645 CDD:173839 132/693 (19%)
Blue background indicates that the domain is not in the aligned region.

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