DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7461 and Gcdh

DIOPT Version :9

Sequence 1:NP_001286611.1 Gene:CG7461 / 37217 FlyBaseID:FBgn0034432 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001102366.1 Gene:Gcdh / 364975 RGDID:1308829 Length:447 Species:Rattus norvegicus


Alignment Length:463 Identity:132/463 - (28%)
Similarity:208/463 - (44%) Gaps:79/463 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SPKLGAESNRSKEKASENESFMANIFRGSLVSSQ-VFPYPDVLTAEQKELT--NSLI-DPF---- 82
            |.|||...:|.....|...:........|:.||: ||.:.|.|..|: :||  ..|| |.|    
  Rat    21 SRKLGLRFSRVPRTWSSAAAHTEKTQIRSVKSSRPVFDWKDPLVLEE-QLTADEKLIRDTFRNYC 84

  Fly    83 -ERFFSDVNDAARNDANSKIDDTTSTALWELGAFGIQVPS--EFGGLGLNNTQYGRLCAIVGVND 144
             ||..|.:..|.||:...:      ..::|:|..|:..|:  .:|..|:::..||.|...:...|
  Rat    85 QERLMSRILLANRNEVFHR------DIVYEMGELGVLGPTIKGYGCAGVSSVAYGLLTRELERVD 143

  Fly   145 LGLGITIGAHQSIGFKGILLYGTPEQKEKYLPKVAAEQVYAAFALTEPSSGSDAGSIRCRAVKSA 209
            .|....:....|:....|..||:.||::||||::|..::...|.||||:.|||.||:..||..:.
  Rat   144 SGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRARHNP 208

  Fly   210 DGKHYVLNGSKIWISNGGIAEIMTVFAQTEQVDPKTGEKKDKVTAFIVERSFGGVTNGPPEKKMG 274
            ..|.|.|:|:|.||:|..:|::..|:|:.|.         :.:..|::|:...|::....|.|..
  Rat   209 SNKSYTLSGTKTWITNSPVADLFVVWARCED---------NCIRGFLLEKGMRGLSAPRIEGKFS 264

  Fly   275 IKASNTAEVYFEDVKIPIENVL-------GKEGDGFKVAMNILNNGRFGMGATLSGTMKKCIEQA 332
            ::||.|..:..:.|::|.||||       |..|        .||..|:|:...:.|..:.|:..|
  Rat   265 LRASATGMIIMDSVEVPEENVLPNVSSLAGPFG--------CLNTARYGITWGVLGAAEFCLHTA 321

  Fly   333 TEHANNRVQFGQKLKNYGSIQEKLAQM---------NILQY--------ATESMAFTISQNMDAG 380
            .::|.:|:|||..|.....:|:|||.|         ..||.        ||..|...:.:|....
  Rat   322 RQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSLLKRNNCGK 386

  Fly   381 SKDYHLEAAISKIYASESAWYVCDEAIQILGGMGYMVDNGLERVLRDLRIFRIFEGTNDILRLFI 445
            :.|                  :..:|..||||.|...:..:.|...:|.....:|||:||..|.:
  Rat   387 ALD------------------IARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALIL 433

  Fly   446 --ALTGIQ 451
              |:||||
  Rat   434 GRAITGIQ 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7461NP_001286611.1 VLCAD 45..454 CDD:173850 126/444 (28%)
CaiA 67..446 CDD:224871 115/414 (28%)
GcdhNP_001102366.1 GCD 57..443 CDD:173840 122/427 (29%)
CaiA 69..443 CDD:224871 118/414 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1960
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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